| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1825 |
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| Symbol | |
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| ID | 4268180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2084825 |
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| End bp | 2085853 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638126581 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_742659 |
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| Protein GI | 114320976 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC TCACAAGGCT TGATGCAGAG GAACCAGCAG TGGACATGGA TATAGTCGAT
TCAGATGATA GGGACAACCG TAGTGAACCC GTGAGCCTGG ACGGGGATAC CCCCCAGGCC
CTTACCGGCG AGACCGAACC CGTTAACCGT CCAGAGCCGC GTCTGCCCCG CCGACGGACG
CAATCGGCCT ACCAGGCCTC CCTGGACGCC ACCCAGATTT ACCTCAATGA AATCGGCTAC
TCCCCGCTGC TCTCCGCGGA GGAGGAGGTC TATTTCTCCC GCCGGGCCCA GCGTGGCGAC
GCCGCCGCCC GCGCCCGCAT GATCGAAAGC AACCTGCGGC TGGTGGTCAA GATCGCGCGT
CGCTATATGA ACCGCGGTCT GGCCTTTCTC GACCTTATTG AGGAGGGCAA CCTGGGGCTC
ATCCGGGCCG TCGAGAAGTT CGATCCCGAG CGGGGCTTCC GGTTCTCCAC CTACGCCACC
TGGTGGATCC GGCAGACCAT CGAGCGGGCC ATCATGAACC AGACCCGCAC CATCCGGTTG
CCCATTCACG TCATCAAGGA GATCAACCAG TATCTGCGGG CGGCCCGCAA GCTGACCCAG
GAGCTGGACC ACGAGCCCTC GGTGGAGGAG ATCGCCGACC ATATGGGCCG TGATGTGGAG
GACGTGCGCC GGATGCGGGG GCTCAATGAG GGCACCACCT CGGTGGACGT GCCCATCGGC
CGTGATGCGG ATCGGGTGCT GCTCGACGCC ATCCCGGATG AAAACAACGT CGACCCGGTC
TCCGCGCTTC AGGACGGCGA TGTCTTTGGC AACTTGGAGG CCTGGCTGGG TGAGCTGACC
GAGAAACAGC GGGCGGTGGT GGAGCGCCGC TTCGGTCTCA ACGGCCATGA TCGGGCGACG
CTGGAGCAGG TCGGCAATGA GATCGGCGTG ACCCGTGAGC GGGTACGCCA GATCCAGATC
GACGCCCTGC GCCGGCTGCG CGAGGTCATG GAGCGGGAGG GGTTCTCCCA GGACGCCGTG
TTCGGCTGA
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| Protein sequence | MADLTRLDAE EPAVDMDIVD SDDRDNRSEP VSLDGDTPQA LTGETEPVNR PEPRLPRRRT
QSAYQASLDA TQIYLNEIGY SPLLSAEEEV YFSRRAQRGD AAARARMIES NLRLVVKIAR
RYMNRGLAFL DLIEEGNLGL IRAVEKFDPE RGFRFSTYAT WWIRQTIERA IMNQTRTIRL
PIHVIKEINQ YLRAARKLTQ ELDHEPSVEE IADHMGRDVE DVRRMRGLNE GTTSVDVPIG
RDADRVLLDA IPDENNVDPV SALQDGDVFG NLEAWLGELT EKQRAVVERR FGLNGHDRAT
LEQVGNEIGV TRERVRQIQI DALRRLREVM EREGFSQDAV FG
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