| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1725 |
|---|
| Symbol | |
|---|
| ID | 4268974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1973826 |
|---|
| End bp | 1975019 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638126483 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_742561 |
|---|
| Protein GI | 114320878 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.685186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTC GCTCCCCATA CCCGCATTAC GATGTCATCG TGATCGGCGC CGGCGCCGCC
GGGCTGATGT GCGCGCTCAC CGCCGGCGGG CGTGGCCGCC GGGTGCTGGT GCTGGACCAT
GCCAACAAGG TGGGCAAGAA GATCCTGATG TCCGGCGGTG GGCGGTGCAA TTTCACCAAC
ATCCACTGCG GGCCCGAGCA CTTTCTGTCG GCCAACCCGC ACTTCGTCAA ATCGGCCCTC
AGTCGCTACA CCCCCTGGCA CTTCATCGCC TTGGTGGAAC AGCACGGCAT CCCCTACCAC
GAAAAGAAGC TGGGCCAGCT CTTCTGCGAC CGCTCCTCCA AGGATATCGT CGGCATGCTG
CTGGCGGAGT GCCGGGCGGT GGGGGTGGCG ATCCGTACCC GCTCGCCGGT CAGCGACCTG
CGGCTGGGGG CACCGCACTG GCTGTCCACT CCGCAGGGCC CGGTGACGTG TTCATCGCTG
GTGATTGCCA CCGGCGGCTA CTCGATTCCG AAGATGGGTG CCACCGGCTT CGGCTTCGAC
CTGGCGCGGT CGCTGGGGAT TCCGGTACGG CCCACCCGTG CGGCGCTGGT GCCGGTGACC
CTGGAGGGGC GCAAGCGGCG CCAGCTGCAG GACCTGGCCG GGGTGGCCCT GGACAGCGTC
ACCCGCGCCG GCGGGGCCGC CTTCCGCGAG AATATCCTGT TCACCCACCG TGGGCTCAGT
GGGCCGGCGA TCCTCCAGGC CTCGTCCTAC TGGCAGCCCG GCGAGCCGCT GGAGATCGAC
CTGTTTCCCG ACACGGATCT GGCCGGGCAC CTGGAGGCGA TGCGCCGGGA GCGCCCGCGT
CTGACCCTGA AGAAGCTGCT GGGCGAGCAA CTCACCCGCC GTGTGGCCCA GCGCTGGTGT
GAACTCTGGC TGCCGGACAG GCGCCTGGAG CAGTTGACCG GCGAGGACAT ACGCCGGATC
CAGCAGGCCT GCCAGCCCTG GACGGTCTGG CCCGATGGCA CCGAAGGGTA CCGTACCGCC
GAGGTGACCC TGGGCGGGGT CGACACCCAT GCGCTATCTT CCAAGACCAT GGCCTGTCGT
GATCACCCGG GGCTCTACTT CATCGGTGAG GTGGTGGATG TCACGGGCCA CCTGGGTGGT
CATAACTTTC AGTGGGCCTG GGCGTCGGGG CATGCGGCGG GGCAGCATGT GTAG
|
|---|
| Protein sequence | MASRSPYPHY DVIVIGAGAA GLMCALTAGG RGRRVLVLDH ANKVGKKILM SGGGRCNFTN
IHCGPEHFLS ANPHFVKSAL SRYTPWHFIA LVEQHGIPYH EKKLGQLFCD RSSKDIVGML
LAECRAVGVA IRTRSPVSDL RLGAPHWLST PQGPVTCSSL VIATGGYSIP KMGATGFGFD
LARSLGIPVR PTRAALVPVT LEGRKRRQLQ DLAGVALDSV TRAGGAAFRE NILFTHRGLS
GPAILQASSY WQPGEPLEID LFPDTDLAGH LEAMRRERPR LTLKKLLGEQ LTRRVAQRWC
ELWLPDRRLE QLTGEDIRRI QQACQPWTVW PDGTEGYRTA EVTLGGVDTH ALSSKTMACR
DHPGLYFIGE VVDVTGHLGG HNFQWAWASG HAAGQHV
|
|---|
| |