| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1701 |
|---|
| Symbol | |
|---|
| ID | 4269787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1945840 |
|---|
| End bp | 1946238 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638126459 |
|---|
| Product | assimilatory nitrite reductase (NAD(P)H) small subunit |
|---|
| Protein accession | YP_742537 |
|---|
| Protein GI | 114320854 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.104071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.427616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC TGGCAACAGA CTATCCCGCT GAAACGACGC CGGCGCATCA CGAGGACTGG
CTGCCCATCG GCCACCTGGA CGACATCCCC CGTCAGGGTG CCCGGGTGGT CGCCCGCCCG
GAGGGCGACG ATATCGCCAT CTTCCGCACC GCCGACGACG CCCTGTTCGC CATCGGCAAC
CGCTGCCCCC ATCAGGGCGG GCCGCTGGAC CAGGGCCTGG TCCACGGGCA CCGGGTGACC
TGCCCGCTAC ATGGCTGGCG CATCCAACTG GAACAGGGCG AGGCCGTCGC CCCGGATCAG
GGCTGTGTGC CGCGCTTCCC GATCCGTCGG GACGACCGGG GAAACCTGTA CGTCCGCCTT
ACACCCGTCG ACGCCGTAAA GGACGCACCG GAGACCTGA
|
|---|
| Protein sequence | MSNLATDYPA ETTPAHHEDW LPIGHLDDIP RQGARVVARP EGDDIAIFRT ADDALFAIGN
RCPHQGGPLD QGLVHGHRVT CPLHGWRIQL EQGEAVAPDQ GCVPRFPIRR DDRGNLYVRL
TPVDAVKDAP ET
|
|---|
| |