Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1687 |
Symbol | |
ID | 4268782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1926552 |
End bp | 1928552 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638126445 |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | YP_742523 |
Protein GI | 114320840 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1138] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGCTG AAACCGGACA ACTGGCCCTG GCATTGGCGC TGGCCCTGGC CCTGGTTCAG GCGGTGCTGC CCCTGGCCGG TGCCGCCCGC GGGGACCGCC GTTGGATGGC GGCTGGCCAC TGGATGGCCT GGGGGGTGTT GCTATTCCTG GCCACCGCCT ACGCCTGCCT GACCACCGCC TTTGTCCAGT ACGACTTCAG CGTGGCCTAT GTGGCCCAGC ACGCCAACCT GGCGCTGCCA CTTCACTACC GCGTCACCGC AGTCTGGGGC GGCCACGAGG GCTCACTGCT GCTCTGGGTG CTCATCCTGG CACTCTGGAC CGTCGCGGTC AGCCACTTCA GCCGCAGCCT GCCCCGGACC ATGGTCGCCC GGATTATCGC CGTGTTGGGG GCGGTGACCG TGGGCTTTCT CGCCTTCATG ATCTTCACCT CCAACCCCTT CGACCGCCTG ATCCCGGCAC CGCTGGACGG CCGCGATCTC AACCCGCTGC TGCAGGACCC GGGGATGATC TTCCACCCGC CGCTGCTCTA CATGGGCTAT GTCGGGTTCT CGGTCACCTT CGCCTTCGCC ATCGCCGCCC TGCTCAACGG CCGGCTCGAC GCCGCCTGGG CCCGCTGGTC CCGGCCCTGG GCCGCGGTGG CGTGGGCCTT CCTCACCCTC GGCATCGCCC TGGGCAGCTG GTGGGCCTAT TACGAGCTCG GCTGGGGCGG CTGGTGGTTC TGGGACCCGG TGGAGAACGC CTCGCTCATG CCCTGGCTCA CCGGCACGGC GCTGATCCAT TCGCTGGCGG TCACCGACAA ACGCGGCGGC TTTCGCGTCT GGACCCTGAT GCTGGCCATT GTCACCTTCG GTCTGACGCT GCTGGGCGCC TTCCTGGTGC GCTCCGGGGT AATCACCTCG GTGCACGCCT TCGCCACCGA CCCCGAGCGC GGCACCTTCA TCCTCGCCTT CCTGGTCCTC AGCATGGGGC TCGCCCTGGC CCTGTACACC TGGCGCGCCC CCCGGGTGGG CCCGGGCCCC GCCTTCGGCT ACCTGTCGCG GGAGTCCGGC CTGCTCGCCA ACAACCTGCT GCTGGCGGTG GCCACGCTCA CGGTGCTGCT GGGCACCCTC TATCCGCTGG CCATGGACGC CTTGGGCGGC GGGCGCATTT CGGTGGGGCC GCCCTATTTC GAGGCGGTCT TCACACCGGT GATGCTGCCG CTGCTGGTCC TCATGGGGCT GGGGCCGCTG CTGCGCTGGA AGCTGCATGC CCCCGGCGAG CTCGCCCGCG CCATCGCCGG CATCGTGGTC GCCGCCGGGG TCATCGGCGG GCTCTGGCCG CTGGCCCTGG GCGCCTGGTC GCCGCTCACC GCCCTGAGTA CCGTCATCGC CAGCTTTATC CTGCTGGCCA TCGCCCTGGA CCTGCACGGC CGGCTCCGCC CGGCGACACC GGGCTGGATC GGGCTGCGCC GTCGGCTCAA GGGGCTGAAG CCGCACTACC TGGGCATGCA CCTGGCCCAC GCCGGGGTGG CGGTCTTTCT CATCGGGGTG GCGATGGTCA GCACCTACGA GGTAGAGCGG GACGTGCGCC TGGCCCCGGG CGACGAGGTG ACCGTAGCCG GTTACACCTT CACCTTCCTC GGCACCCACG AGCGGGTGGG CAGCAACTTC CTGGCCGACA CCGGGCGGGT GACCGTGACC CGGGACGGTC AGGCGATCGC CCGGCTGCAT CCGGAGAAGC GCCACTACCC CAGCCAGTCG ATGCCCATGA CCCAGGCCGC GCTCGACCGC GGCCTGTTCC GCGATCTCTA TGTCTCGCTC GGCGACCCAT TGGACGACGG GGCCTGGGTG GTGCGCGTCT ACTACAAGCC CTACATGACC TGGCTCTGGG GCGGCTGCCT GTTCTTGACC CTGGGGGCCC TGCTTGCCGC CACCGACCGG CGCTACCGAC TGGTGCGCGC CCCCCGGACC CGACCGGCCC GCCCGGCAGG AGCGCTTCGC CCCGGGGAGG CGTCATGCTG A
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Protein sequence | MIAETGQLAL ALALALALVQ AVLPLAGAAR GDRRWMAAGH WMAWGVLLFL ATAYACLTTA FVQYDFSVAY VAQHANLALP LHYRVTAVWG GHEGSLLLWV LILALWTVAV SHFSRSLPRT MVARIIAVLG AVTVGFLAFM IFTSNPFDRL IPAPLDGRDL NPLLQDPGMI FHPPLLYMGY VGFSVTFAFA IAALLNGRLD AAWARWSRPW AAVAWAFLTL GIALGSWWAY YELGWGGWWF WDPVENASLM PWLTGTALIH SLAVTDKRGG FRVWTLMLAI VTFGLTLLGA FLVRSGVITS VHAFATDPER GTFILAFLVL SMGLALALYT WRAPRVGPGP AFGYLSRESG LLANNLLLAV ATLTVLLGTL YPLAMDALGG GRISVGPPYF EAVFTPVMLP LLVLMGLGPL LRWKLHAPGE LARAIAGIVV AAGVIGGLWP LALGAWSPLT ALSTVIASFI LLAIALDLHG RLRPATPGWI GLRRRLKGLK PHYLGMHLAH AGVAVFLIGV AMVSTYEVER DVRLAPGDEV TVAGYTFTFL GTHERVGSNF LADTGRVTVT RDGQAIARLH PEKRHYPSQS MPMTQAALDR GLFRDLYVSL GDPLDDGAWV VRVYYKPYMT WLWGGCLFLT LGALLAATDR RYRLVRAPRT RPARPAGALR PGEASC
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