Gene Mlg_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1687 
Symbol 
ID4268782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1926552 
End bp1928552 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content70% 
IMG OID638126445 
Productcytochrome c-type biogenesis protein CcmF 
Protein accessionYP_742523 
Protein GI114320840 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1138] Cytochrome c biogenesis factor 
TIGRFAM ID[TIGR00353] c-type cytochrome biogenesis protein CcmF 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGCTG AAACCGGACA ACTGGCCCTG GCATTGGCGC TGGCCCTGGC CCTGGTTCAG 
GCGGTGCTGC CCCTGGCCGG TGCCGCCCGC GGGGACCGCC GTTGGATGGC GGCTGGCCAC
TGGATGGCCT GGGGGGTGTT GCTATTCCTG GCCACCGCCT ACGCCTGCCT GACCACCGCC
TTTGTCCAGT ACGACTTCAG CGTGGCCTAT GTGGCCCAGC ACGCCAACCT GGCGCTGCCA
CTTCACTACC GCGTCACCGC AGTCTGGGGC GGCCACGAGG GCTCACTGCT GCTCTGGGTG
CTCATCCTGG CACTCTGGAC CGTCGCGGTC AGCCACTTCA GCCGCAGCCT GCCCCGGACC
ATGGTCGCCC GGATTATCGC CGTGTTGGGG GCGGTGACCG TGGGCTTTCT CGCCTTCATG
ATCTTCACCT CCAACCCCTT CGACCGCCTG ATCCCGGCAC CGCTGGACGG CCGCGATCTC
AACCCGCTGC TGCAGGACCC GGGGATGATC TTCCACCCGC CGCTGCTCTA CATGGGCTAT
GTCGGGTTCT CGGTCACCTT CGCCTTCGCC ATCGCCGCCC TGCTCAACGG CCGGCTCGAC
GCCGCCTGGG CCCGCTGGTC CCGGCCCTGG GCCGCGGTGG CGTGGGCCTT CCTCACCCTC
GGCATCGCCC TGGGCAGCTG GTGGGCCTAT TACGAGCTCG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TGGAGAACGC CTCGCTCATG CCCTGGCTCA CCGGCACGGC GCTGATCCAT
TCGCTGGCGG TCACCGACAA ACGCGGCGGC TTTCGCGTCT GGACCCTGAT GCTGGCCATT
GTCACCTTCG GTCTGACGCT GCTGGGCGCC TTCCTGGTGC GCTCCGGGGT AATCACCTCG
GTGCACGCCT TCGCCACCGA CCCCGAGCGC GGCACCTTCA TCCTCGCCTT CCTGGTCCTC
AGCATGGGGC TCGCCCTGGC CCTGTACACC TGGCGCGCCC CCCGGGTGGG CCCGGGCCCC
GCCTTCGGCT ACCTGTCGCG GGAGTCCGGC CTGCTCGCCA ACAACCTGCT GCTGGCGGTG
GCCACGCTCA CGGTGCTGCT GGGCACCCTC TATCCGCTGG CCATGGACGC CTTGGGCGGC
GGGCGCATTT CGGTGGGGCC GCCCTATTTC GAGGCGGTCT TCACACCGGT GATGCTGCCG
CTGCTGGTCC TCATGGGGCT GGGGCCGCTG CTGCGCTGGA AGCTGCATGC CCCCGGCGAG
CTCGCCCGCG CCATCGCCGG CATCGTGGTC GCCGCCGGGG TCATCGGCGG GCTCTGGCCG
CTGGCCCTGG GCGCCTGGTC GCCGCTCACC GCCCTGAGTA CCGTCATCGC CAGCTTTATC
CTGCTGGCCA TCGCCCTGGA CCTGCACGGC CGGCTCCGCC CGGCGACACC GGGCTGGATC
GGGCTGCGCC GTCGGCTCAA GGGGCTGAAG CCGCACTACC TGGGCATGCA CCTGGCCCAC
GCCGGGGTGG CGGTCTTTCT CATCGGGGTG GCGATGGTCA GCACCTACGA GGTAGAGCGG
GACGTGCGCC TGGCCCCGGG CGACGAGGTG ACCGTAGCCG GTTACACCTT CACCTTCCTC
GGCACCCACG AGCGGGTGGG CAGCAACTTC CTGGCCGACA CCGGGCGGGT GACCGTGACC
CGGGACGGTC AGGCGATCGC CCGGCTGCAT CCGGAGAAGC GCCACTACCC CAGCCAGTCG
ATGCCCATGA CCCAGGCCGC GCTCGACCGC GGCCTGTTCC GCGATCTCTA TGTCTCGCTC
GGCGACCCAT TGGACGACGG GGCCTGGGTG GTGCGCGTCT ACTACAAGCC CTACATGACC
TGGCTCTGGG GCGGCTGCCT GTTCTTGACC CTGGGGGCCC TGCTTGCCGC CACCGACCGG
CGCTACCGAC TGGTGCGCGC CCCCCGGACC CGACCGGCCC GCCCGGCAGG AGCGCTTCGC
CCCGGGGAGG CGTCATGCTG A
 
Protein sequence
MIAETGQLAL ALALALALVQ AVLPLAGAAR GDRRWMAAGH WMAWGVLLFL ATAYACLTTA 
FVQYDFSVAY VAQHANLALP LHYRVTAVWG GHEGSLLLWV LILALWTVAV SHFSRSLPRT
MVARIIAVLG AVTVGFLAFM IFTSNPFDRL IPAPLDGRDL NPLLQDPGMI FHPPLLYMGY
VGFSVTFAFA IAALLNGRLD AAWARWSRPW AAVAWAFLTL GIALGSWWAY YELGWGGWWF
WDPVENASLM PWLTGTALIH SLAVTDKRGG FRVWTLMLAI VTFGLTLLGA FLVRSGVITS
VHAFATDPER GTFILAFLVL SMGLALALYT WRAPRVGPGP AFGYLSRESG LLANNLLLAV
ATLTVLLGTL YPLAMDALGG GRISVGPPYF EAVFTPVMLP LLVLMGLGPL LRWKLHAPGE
LARAIAGIVV AAGVIGGLWP LALGAWSPLT ALSTVIASFI LLAIALDLHG RLRPATPGWI
GLRRRLKGLK PHYLGMHLAH AGVAVFLIGV AMVSTYEVER DVRLAPGDEV TVAGYTFTFL
GTHERVGSNF LADTGRVTVT RDGQAIARLH PEKRHYPSQS MPMTQAALDR GLFRDLYVSL
GDPLDDGAWV VRVYYKPYMT WLWGGCLFLT LGALLAATDR RYRLVRAPRT RPARPAGALR
PGEASC