| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1678 |
|---|
| Symbol | |
|---|
| ID | 4268910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1920168 |
|---|
| End bp | 1920758 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638126436 |
|---|
| Product | NapC/NirT cytochrome c domain-containing protein |
|---|
| Protein accession | YP_742514 |
|---|
| Protein GI | 114320831 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.184526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAAGA TCAAACGTGG CATCCGCTAT ATACTGCGGC CGCCCACCAA GCTGGCCACC
TGTGCGGTCA TCTCGGCCGT GGCCATTGTC GTCCTCGGCT TTTTCGCGTC GGTGAACGCC
TTTGTCGCCT TCACCAACAC CTCGGAGTTC TGCGCCTCCT GCCACAGCAT CGCCCCCGCG
GTGGAGGAGT GGCGGGAGAG CAGCCACTAC GCCAACGCCC ACGGGGTGCG CGCGGAGTGC
GCCGACTGTC ATGTCCCGGA CACCCTGGGC GCGACCCTGG CGGCCAAGGT TCGGGCGATC
AATGACATCT ACCACCACTT CGCCGGCACC ATTGACACCC CTGAAAAGTT CGAGGAACGC
CGGCCGGTGC TGGCGCAACG GGTCTGGGAC GCCATGGAGG CGGACGATTC ACTGGCCTGC
CGTAGTTGCC ACAGCTGGGA CAGCATGGAC CTGGCCCAAC AGTCCGGTCG CGGCGGCCGC
AACCACCGCG AGGCCATGGA AGAGGGCAAG ACCTGCATCA GCTGCCACCA GGGCGTGGTG
CACAAGCTCC CGGGCGAGGA CGAGGACCCG GGCTTCGACC TCGGTCTTTG A
|
|---|
| Protein sequence | MGKIKRGIRY ILRPPTKLAT CAVISAVAIV VLGFFASVNA FVAFTNTSEF CASCHSIAPA
VEEWRESSHY ANAHGVRAEC ADCHVPDTLG ATLAAKVRAI NDIYHHFAGT IDTPEKFEER
RPVLAQRVWD AMEADDSLAC RSCHSWDSMD LAQQSGRGGR NHREAMEEGK TCISCHQGVV
HKLPGEDEDP GFDLGL
|
|---|
| |