Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1645 |
Symbol | |
ID | 4270246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 1883724 |
End bp | 1886882 |
Gene Length | 3159 bp |
Protein Length | 1052 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638126403 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_742481 |
Protein GI | 114320798 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.697707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAG CGTCGGCAAC AAAGCGAATC CTCGGCTGGC AGCCCTTTTA TCTCTCGCTG CTGAGCATTG CCCTGATCGC AGCGGCGGCG GTCTGGTACG TCTGGGCGGA TTGGGACACC CGGCGGTCGC TGCTGATCCG GGAGCACGTT GCCGCGGTGG ACACCGCGGT GCAGGCCGCC AGCGGCGGCA TGGCCCTGGC CAGTGAGCTG TTGCACCAGG GGATGATCCT GCGGCCCCCG GTCACTGGCG CCGTGGCGGC GGCCGGGCAG GGTGATCCGG CCGTCCGGGC GGAGTTGCGG GACTGGCTAT ACCGGGAGCT GGGCCCGGTC TATCAGATGC TGCAGGCGCG GGGCCTGGAT CAGATGCAGT TCGTGCTGGC CGATGGCGAG AGCCTGCTGC GTTTCCATGC CCCGGAAAGC CATGGCGATA ACCTGTTACC GGACCGCGGT GACATTGCCC ACGTGCTGGC GACGGGGGAG CCCCTGCAGG TCACCGGGCC GGGCCGCTTC ACGCAGGCGC ACCGGTATAT CACGCCCCTG TATCATGGGG GCGAGCTGCT CGGTGTGGTG GAGACGGGGA TGTCCATGGC CGCGTTGCAC CGGCGGCTGG ATGAGCTCGC CCCGGGCATG GCCTTCCGCA TGCTGCTCCG AGCGGACCGG GTCACCGAGG TGGCCCGAGA GGAGGTGGCG GCCCGGTTTC ACGCCAGTCC CTTGTCCGAC GCCTATGTCC TCGATCATGG GCACGACCTG GCGGACTGGT ATGCCGACGA AGATGGCGAG GGGCTGGCGG CGGTGGAGGC GCAGCTGTCG CGGCAACCGG GCCTGGAGGG GGCGCTGGCC CGCGGGGAGG CCTTCGGCCG TGCCCTGGAA TACCGGGGTC AGGGGTACCT GGTGGCGTTC GTGCCGATGC TCGACGCCCG CGGCGAGGTC GTCGGCTATG TGGTGGGCTA CGGCCGGACC GGGGCCCTGG GCAGTCTCAA ACACCAGTTC TATGCCGGCG CGGCCTTCGC GCTCCTGTTG GTGCTCGGGG CCGGCGGGGT GTTGTTGCGG TTCCTGGCGG TGCAGCGTGG CCGACTGCAG GACGAGGCCC GACTGCGGGC GATCTCCGAC ACCATGAACG AGGGGATGTA CGTCTTCGAC GGCGAGGGTC GGATCACGCA CGTCAACCGG GCGGCGGAGA CCTTGCTGGG CTACCGTGCC AGCGAACTGA TCGGGGCCCA TGCCCACGAC CTCTTCCACG CCCATGGGCC TGAGGGCCAG TACATGCCGG CCGCTGAGTG CCCCGTTTAT CGGGCCGCGG TGCGAGGGGA GCGGCTCCAG TTGGACTCCG AGTGGTTTCG TCGCCGCGAC GGCAGTCACG TGCCGGTTCA GATCTTCGGG GCACCGATCG GGGACTGGCC GGAGGGCCAT GCGGGGTCGC GGCCAAACCC GACCTACGTG GTCACCTTTG TTGACGAGAC CGAGCGCCGG AGAGAGCGCG AGGCCTTGCG CAAGCTCTCT GCGGTGGTGG AGCAGGGGCC CGGTGCAGTG ATGATCACGG ACCCGCAGGG CGTGATCGAG TACGTCAACC CGGCCTTCGA GCGGATTACT GGCTACACCG CGGAAGAGGC GGTGGGGCAG ACACCGCGCA TCATCCAGTC GGGTCTGATG CCCTCGTCCT GGTACCGGGA GATGTGGGCG GCCCTGAACC GGGGCGAGCC TTGGTGGGGT GAGTTCCACA ACCGACGCAA GACCGGTGAG CTGTTCTGGG AGGCCGGGGT CGTGTTCCCT CTGCGTGACG ATCAGGGCGG GATCACCCAC TACATCGCCA TCAAACAGGA TGTCACAGAG CGCAAAGACG CCGAGCGCCG GCTGGAGTAT CACGCCACCC ACGACACCGT GACCGGCCTG CCCAACCGGG CGCTGGCCAT GGACCGCCTG GAGACCGCGG TTCGCCGGCT GGCGCATCGG CGTGGTCGGG GCTCAGGGGC GTTGTTGGTC CTGGACCTGA GCCAGTTTCG AAAGATCAAT GAGAGCCTGG GCCATGCCTC CGGCGATGAG TTGCTGTGCC GAATCGCCGA GCGCCTGCAG GGCGCGCTCG GCCCACACGA CACCCTGTGC CGGCCCGGTG GTGATGAGTT CCTGGTCATC CTGCCGGAGC TGCGCACCGC CCGACAGGCC GAACAAGTGG CCAAGGCGCT CCTGGCCACC CTGAAGGCCC CACTGGTGCT GGCCGACCAG GAGATATTCA TGGACGCCAG GGTGGGGGTG ACCCTGTTCC CGGAAGACGG GACCGATAGC AGTACGCTGT TGCGTAACGC TTACGCCGCC CTGTCCCAAG CCAAGCAGGT GGCGCGGGGT GACTTCCGCT TCTTCAAACC CGAGGCGAAT GAGCGGGCCC ACCGCTGGCT GGCGCTGGAG GGGCGGCTGC GCCGTGCGCT GGAACAGGAG ACGCTGCACC TGGTGTTTCA ACCGCTGGTC GATGCCCGGA CCCTGCGGCC GACGGGGTTC GAAACCCTCC TGCGCTGGAC GCTGGAGGAG CACGGGCCGG TCTCTCCGGG TGAGTTCATT CCCATGGCCG AGGAGACCGG GCTGATCATC CCCATGGGCG AATGGGTTCT GCGCAAGGCC TGTCAGCAGG CCGCCCGCTG GCGGGCCCAG ACCGGGCATT GCTATCGGAT GGCGGTGAAT GTCTCGCCCA TCCAGATCAC GGGGAGCGAT TTCGTGGCCA CCGTGCGCAC CAGCCTCAGG CGTACGGGTC TGCCCGCCGA GTGCTTGGAA CTGGAGATTA CCGAGCGCAT GCTGCTTGGG GGCCAGCGGC GCGTGCTGCA GAGCCTGCAG GCGCTGCGCG ATTTGGGGGT GGGGCTGTCG TTGGACGACT TCGGCACCGG CTACTCAGCC CTGAGCTACC TGCGCCAGAT GCCGTTTTCC GTGCTCAAGA TCGACCGCAG CTTTGTCCAG GGCGCGGCGG CGGGCCCCCG CGGCGAGCAG CTGTTGTGCT CGATCATCGG TATGGCCCAG GGCCTGGGTC TGCGGGTGGT GGCCGAAGGG GTGGAGACAG AGGCCCAGGT GGCCCTCCTG CAGCGCGAGG GCTGTGATCT GCTGCAGGGG TACCACTTCG CCCGACCCAT GGCGGCCGAG GCCGTCACCC GTCTGCTCCA GGGCCCGGAG CGCCCTTAA
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Protein sequence | MLKASATKRI LGWQPFYLSL LSIALIAAAA VWYVWADWDT RRSLLIREHV AAVDTAVQAA SGGMALASEL LHQGMILRPP VTGAVAAAGQ GDPAVRAELR DWLYRELGPV YQMLQARGLD QMQFVLADGE SLLRFHAPES HGDNLLPDRG DIAHVLATGE PLQVTGPGRF TQAHRYITPL YHGGELLGVV ETGMSMAALH RRLDELAPGM AFRMLLRADR VTEVAREEVA ARFHASPLSD AYVLDHGHDL ADWYADEDGE GLAAVEAQLS RQPGLEGALA RGEAFGRALE YRGQGYLVAF VPMLDARGEV VGYVVGYGRT GALGSLKHQF YAGAAFALLL VLGAGGVLLR FLAVQRGRLQ DEARLRAISD TMNEGMYVFD GEGRITHVNR AAETLLGYRA SELIGAHAHD LFHAHGPEGQ YMPAAECPVY RAAVRGERLQ LDSEWFRRRD GSHVPVQIFG APIGDWPEGH AGSRPNPTYV VTFVDETERR REREALRKLS AVVEQGPGAV MITDPQGVIE YVNPAFERIT GYTAEEAVGQ TPRIIQSGLM PSSWYREMWA ALNRGEPWWG EFHNRRKTGE LFWEAGVVFP LRDDQGGITH YIAIKQDVTE RKDAERRLEY HATHDTVTGL PNRALAMDRL ETAVRRLAHR RGRGSGALLV LDLSQFRKIN ESLGHASGDE LLCRIAERLQ GALGPHDTLC RPGGDEFLVI LPELRTARQA EQVAKALLAT LKAPLVLADQ EIFMDARVGV TLFPEDGTDS STLLRNAYAA LSQAKQVARG DFRFFKPEAN ERAHRWLALE GRLRRALEQE TLHLVFQPLV DARTLRPTGF ETLLRWTLEE HGPVSPGEFI PMAEETGLII PMGEWVLRKA CQQAARWRAQ TGHCYRMAVN VSPIQITGSD FVATVRTSLR RTGLPAECLE LEITERMLLG GQRRVLQSLQ ALRDLGVGLS LDDFGTGYSA LSYLRQMPFS VLKIDRSFVQ GAAAGPRGEQ LLCSIIGMAQ GLGLRVVAEG VETEAQVALL QREGCDLLQG YHFARPMAAE AVTRLLQGPE RP
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