Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1627 |
Symbol | |
ID | 4269359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 1858085 |
End bp | 1862110 |
Gene Length | 4026 bp |
Protein Length | 1341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638126384 |
Product | ATP-dependent helicase HrpA |
Protein accession | YP_742463 |
Protein GI | 114320780 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCA GAGCACGCCG CCGCAACCTT CCCGACGCCC TCCGGCAACT TCGGCCCCGC ATCGACCGGG CCTTTGGCCC GGCGCGCCCG GCCCTGCGCA AGCGGCTTGC CGGCCTGGAG CGTCGTGCCC ACGACGGCAA GCCCTTCGAC AAGGGGTTGG TGAAGCTGGA GCGGGACATC GCCGTGGCCT GCCAACGGGC CGAGACCCGC GCGGCGAACC TGCCCAGCCC CCGCTTTGAC CCGTCGCTGC CCGTCAACCA GCGGCTGGAC GACCTGCGTG AGGCGATCCG CGACCACCAG GTGGTGGTGA TCTGCGGGGC CACCGGCTCA GGGAAATCCA CCCAGATCCC TAAGATCTGC ATGGCGCTGG GCCGCGGGGT ACACGGTTGG ATCGGCCACA CCCAGCCGCG GCGCCTGGCG GCGCGCACGC TCGCTCAGCG GATCAGCGAC GAGCTGGGGA CGGCGCTGGG TGAGGCGGTG GGCTACAAGG TGCGCTTCAC CGATCAGGTG AGCGAGCGTA CCCACCTCAA ACTGCTCACC GACGGCATGC TCCTGGCAGA GATCCAGCGC GACCGCCATT TGGACGCCTA CGACACCCTG ATTATCGACG AGGCCCACGA GCGCAGCCTC AACATCGACT TCATCCTCGG CTACCTCAAG CGCCTGCTGC CCCGCCGGCC GGATCTGAAG GTCATCATCA CCTCCGCCAC CATCGACCCG GAGCGCTTCT CCAAGCATTT CGATGAGGCG CCGATCCTGG AGGTCAGCGG CCGCACCTAC CCGGTGGAGG TGCGCTACCG GCCCATGGTG GACGACGAGG ACGAGCGCGA CGAGGACCTG CCTGGGGCCG TGGTGGAGGC GGTGCATGAG CTGGCCCGGG AGCCGGGGCA GGGGGACGTG CTGGTGTTCC TCTCCGGTGA GCGGGAGATC CGCGAGTGCA CCGAAGCGCT GCGCAAGAAA CACCCTCCGC ACACCGAGGT CCTGCCCTTG TATGCCCGCC TCTCCGCCGC TGAGCAGCAG CGCGTGTTCA ACCCTAAGGG GGGTGGCCGT CGGGTGGTGC TGGCCACCAA CGTGGCCGAG ACTTCGGTCA CCGTGCCCGG CATCCGGTAC GTAGTGGACT CCGGCTACGC CCGCATTAAC CGCTACAGTT ACCGGACCAA GGTCTCGCGT CTGCCCATCG AACCGATCAG CCAGGCCTCC GCCAATCAGC GGGCCGGGCG CTGCGGCCGG GAGGCCCCGG GGGTGGCCAT CCGCCTGTAC AGCGAGGAGG ACTTTGCGGG CCGTTCGGCG TTCACCGACC CCGAGATCCA GCGCACCAAC CTGGCCGCCG TCATCCTGCA GATGAAGGCC CTGGGCCTGG GGGATATCCA GCGGTTTCCC TTCGTCGAGC CGCCGGAGCA CAAGTTCGTC AACGATGGGT TCAAACTGCT GCACGAACTC GGCGCGGTGA CGGAGGATCG CGAACTCACC GCCCTTGGAC GCCAACTGGC AAGACTGCCG CTGGACCCGC CGGTAGGGCG GATGTTGCTG GCTGCCCGCG AGCAGGGGGT GCTGGACGAG GTGCTGGTGA TCGCCGCCGC ACTCTCGGTC CAGGACCCGC GTGAGCGGCC CCTGGACGCC CAGCAGGCCG CCGATCAGGC GCACGCCCAG TGGCGGCACG GGAAGAGTGA CTTCCTCTCG CTGGTGCTGC TCTGGCAGGA CTACCACCGC CAGAAGCGCC GGCTCAGTAA CCGCCAGCTT CGCCAATGGT GTCGCGAGCG CTTCCTGAGC CCGCACCGGA TGCGCGAGTG GCTGGATATC CACCGCCAGA TCCGAGAGCT GGTGAGTGGC CTGTCCGGCG GCGCGGACCG CAAGGGCGCA GGGGGCGGGC CGGGCCGGCC CCTGCGCTCC ACCGGGAGCG AAGGGGCGGC CGCCTCGCCG CTGGCCCGCC CGCACACCGT GACCACGGAG CAGTGCGCCG AGTGGCTGGA TACCCACTAT GAGGCCCTCC ACCGCGCGCT GCTCGCGGGA TTGGTCAGCA ATATCGCACA ACACCATGAA AACAAGGAGT ATCTCGGTCC GCGCGGGGTG AAGCTGATGA TCTTCCCAGG TTCCGGCCAG TTCAAGCGTA ACCCCAAGTG GATCGTGGCC GCGGAGTTCG TCGAGACCAG TCGGCTGTTC GCCCGGACGG CGGCGGAGGT GAAGCCGGAG TGGATCGAGC AGACCGCGGC CCACCTGGTC AGTCGCAGCT ATGCCGAGCC CCACTGGGAG AAGAAACCCG CCCAGGTGGC CGCGTACGAG AAGGTCACCC TCTACGGTCT GGTGCTCGCC AGTCAGCGCC GGGTCAACTA CGGCCCCATA GACCCGCCGG TGGCCCGGGC CATCTTCATC CGGGAGGCGC TGGTTCAGGG CGAGTACCGC ACCCGGGCCC CGTTCTGGGA GCACAACCGG CGGCTGATCG AGGAGATCGA GCGCCTGGAG GCCAAGGCCC GGCGCCGGGA TGTGCTGGTG GACGAGGAGA CCCGCTTCCG GTTCTACGAC CAGCGTATCC CCGAGGGCAT CTACAGCGGG GCCGCCTTCG AGCGCTGGCT CGGGGAGGTC AGCCGGGATG ATCCAAAGCG CCTGCACATG AGCCGTGAGG CGCTGATGCG TGACGACGCC GATCCGGTCT CCGGTGAGGC CTACCCGGAC CGACTGCGCC TGCCCGGCGG CTTGGAGCTG CCGCTGGAGT ACCACCTGGA GCCGGGCAGC GAGCTGGACG GGGTGGTGGC GCGGGTGCCG GTGGCGGCCC TCAACCAGTT GCGCCCGGAG CCGTTCGAGT GGCTGGTCCC CGGCCTGGTG CACGAAAAAG TGGTGGCCCT GATCCGGGGG CTGCCTAAGG CCATCCGGCG CAACTTCGTC CCGGCGCCCG ATTTTGCCCG CGCCGTGCTC GAGGCCATTC CCCATGGCGA GGGGTCCCTG ACCGATGCGG TGGCGCGCCA GCTCAAGCGG ATGACCGGCG TGGACATTCC CCCGGGTGCG CTGGATGCGG TGGCCCTGCC CGAGCACCTG CGCATGCACT ACCGCGTGCT CGATGAACAG GGCAACACCC TGCGTACGGG CAGTGACTTG GCGGCCCTCC AGCAGGGGCT GGGGGATCAG GCCAGTGAGA GCTTCTCCGC CTCCGGCGGC GGGGCCTCGG AATGGACCCG CGAGGGCATC ACGACATGGG ACTTCGGCGA TCTGCCGGAG GCCGTTGAGA TCGGGCGTAA CGGGCTGACC ATCCGCGGAT ACCCGTGTCT GGTGGACGAG GAGAGCTCGG TCCGCCTCAC CCTGGCTGAC AGTCCCGATG AGGCGGAGCG CCAGCACCGG GCCGGCGTAC GCCGCCTGTA TATGCTGGCG CTGCCCCAGC AGGTGCGCTA TCTCCGCCGG GGGCTGCCGG GCCTGGACCG GCTGCGTCTG GCCTACCGCG GTCTCGGGTC CGACGAGGAT CTGAAGCGGG AGCTGGTCCA TGCCGCCGTC GACCGGACCT TCCTCGGCGA CGCCCCGCCG CGCACGGAGG CGGCCTTCCG GCAGCGCCTG GAACGGGGCC GGCCGCGACT GGTGGAGAAC GCCCAACGGC TGGCGGAGGG GCTGGAGGAG GTGCTGGGAC GCTACCAGGC CATCCGCAAA GCCCTGAAGC AGTTCAACGC CCTGGCACTG ATGGACAGCC TCAAGGACCT GCAGGAGCAC TTGGAATGCC TGGTCTACCC GGGCTTTCTC CAGCAGACAC CGCCGGAGTA CCTGGCCGAG TTGCCCCGCT ACCTGCGGGC CCTGGAGCGG CGGGTGGAAA AGCTGCGGCA GGACCCGGGC CGGGATCGTA CGCCTCTGCG CAGTATCCGG CCCTGGTGGG AGCGCTGGCG TGAGCGCCAG AGTCGCCGGG AGGCCCAAGG CAAACCCGAC CCTGCCCTAG AGCGCTTCCG CTGGCTGCTG GAGGAGTACC GCGTCTCGCT CTTTGCGCAA GAGGTGGGGG CCCGGGAAAA GGTGTCAGAG AAGCGCTTGA AGGCGGCCTG GAAGGAGGTG GCCTGA
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Protein sequence | MTARARRRNL PDALRQLRPR IDRAFGPARP ALRKRLAGLE RRAHDGKPFD KGLVKLERDI AVACQRAETR AANLPSPRFD PSLPVNQRLD DLREAIRDHQ VVVICGATGS GKSTQIPKIC MALGRGVHGW IGHTQPRRLA ARTLAQRISD ELGTALGEAV GYKVRFTDQV SERTHLKLLT DGMLLAEIQR DRHLDAYDTL IIDEAHERSL NIDFILGYLK RLLPRRPDLK VIITSATIDP ERFSKHFDEA PILEVSGRTY PVEVRYRPMV DDEDERDEDL PGAVVEAVHE LAREPGQGDV LVFLSGEREI RECTEALRKK HPPHTEVLPL YARLSAAEQQ RVFNPKGGGR RVVLATNVAE TSVTVPGIRY VVDSGYARIN RYSYRTKVSR LPIEPISQAS ANQRAGRCGR EAPGVAIRLY SEEDFAGRSA FTDPEIQRTN LAAVILQMKA LGLGDIQRFP FVEPPEHKFV NDGFKLLHEL GAVTEDRELT ALGRQLARLP LDPPVGRMLL AAREQGVLDE VLVIAAALSV QDPRERPLDA QQAADQAHAQ WRHGKSDFLS LVLLWQDYHR QKRRLSNRQL RQWCRERFLS PHRMREWLDI HRQIRELVSG LSGGADRKGA GGGPGRPLRS TGSEGAAASP LARPHTVTTE QCAEWLDTHY EALHRALLAG LVSNIAQHHE NKEYLGPRGV KLMIFPGSGQ FKRNPKWIVA AEFVETSRLF ARTAAEVKPE WIEQTAAHLV SRSYAEPHWE KKPAQVAAYE KVTLYGLVLA SQRRVNYGPI DPPVARAIFI REALVQGEYR TRAPFWEHNR RLIEEIERLE AKARRRDVLV DEETRFRFYD QRIPEGIYSG AAFERWLGEV SRDDPKRLHM SREALMRDDA DPVSGEAYPD RLRLPGGLEL PLEYHLEPGS ELDGVVARVP VAALNQLRPE PFEWLVPGLV HEKVVALIRG LPKAIRRNFV PAPDFARAVL EAIPHGEGSL TDAVARQLKR MTGVDIPPGA LDAVALPEHL RMHYRVLDEQ GNTLRTGSDL AALQQGLGDQ ASESFSASGG GASEWTREGI TTWDFGDLPE AVEIGRNGLT IRGYPCLVDE ESSVRLTLAD SPDEAERQHR AGVRRLYMLA LPQQVRYLRR GLPGLDRLRL AYRGLGSDED LKRELVHAAV DRTFLGDAPP RTEAAFRQRL ERGRPRLVEN AQRLAEGLEE VLGRYQAIRK ALKQFNALAL MDSLKDLQEH LECLVYPGFL QQTPPEYLAE LPRYLRALER RVEKLRQDPG RDRTPLRSIR PWWERWRERQ SRREAQGKPD PALERFRWLL EEYRVSLFAQ EVGAREKVSE KRLKAAWKEV A
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