Gene Mlg_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1627 
Symbol 
ID4269359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1858085 
End bp1862110 
Gene Length4026 bp 
Protein Length1341 aa 
Translation table11 
GC content69% 
IMG OID638126384 
ProductATP-dependent helicase HrpA 
Protein accessionYP_742463 
Protein GI114320780 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01967] ATP-dependent helicase HrpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA GAGCACGCCG CCGCAACCTT CCCGACGCCC TCCGGCAACT TCGGCCCCGC 
ATCGACCGGG CCTTTGGCCC GGCGCGCCCG GCCCTGCGCA AGCGGCTTGC CGGCCTGGAG
CGTCGTGCCC ACGACGGCAA GCCCTTCGAC AAGGGGTTGG TGAAGCTGGA GCGGGACATC
GCCGTGGCCT GCCAACGGGC CGAGACCCGC GCGGCGAACC TGCCCAGCCC CCGCTTTGAC
CCGTCGCTGC CCGTCAACCA GCGGCTGGAC GACCTGCGTG AGGCGATCCG CGACCACCAG
GTGGTGGTGA TCTGCGGGGC CACCGGCTCA GGGAAATCCA CCCAGATCCC TAAGATCTGC
ATGGCGCTGG GCCGCGGGGT ACACGGTTGG ATCGGCCACA CCCAGCCGCG GCGCCTGGCG
GCGCGCACGC TCGCTCAGCG GATCAGCGAC GAGCTGGGGA CGGCGCTGGG TGAGGCGGTG
GGCTACAAGG TGCGCTTCAC CGATCAGGTG AGCGAGCGTA CCCACCTCAA ACTGCTCACC
GACGGCATGC TCCTGGCAGA GATCCAGCGC GACCGCCATT TGGACGCCTA CGACACCCTG
ATTATCGACG AGGCCCACGA GCGCAGCCTC AACATCGACT TCATCCTCGG CTACCTCAAG
CGCCTGCTGC CCCGCCGGCC GGATCTGAAG GTCATCATCA CCTCCGCCAC CATCGACCCG
GAGCGCTTCT CCAAGCATTT CGATGAGGCG CCGATCCTGG AGGTCAGCGG CCGCACCTAC
CCGGTGGAGG TGCGCTACCG GCCCATGGTG GACGACGAGG ACGAGCGCGA CGAGGACCTG
CCTGGGGCCG TGGTGGAGGC GGTGCATGAG CTGGCCCGGG AGCCGGGGCA GGGGGACGTG
CTGGTGTTCC TCTCCGGTGA GCGGGAGATC CGCGAGTGCA CCGAAGCGCT GCGCAAGAAA
CACCCTCCGC ACACCGAGGT CCTGCCCTTG TATGCCCGCC TCTCCGCCGC TGAGCAGCAG
CGCGTGTTCA ACCCTAAGGG GGGTGGCCGT CGGGTGGTGC TGGCCACCAA CGTGGCCGAG
ACTTCGGTCA CCGTGCCCGG CATCCGGTAC GTAGTGGACT CCGGCTACGC CCGCATTAAC
CGCTACAGTT ACCGGACCAA GGTCTCGCGT CTGCCCATCG AACCGATCAG CCAGGCCTCC
GCCAATCAGC GGGCCGGGCG CTGCGGCCGG GAGGCCCCGG GGGTGGCCAT CCGCCTGTAC
AGCGAGGAGG ACTTTGCGGG CCGTTCGGCG TTCACCGACC CCGAGATCCA GCGCACCAAC
CTGGCCGCCG TCATCCTGCA GATGAAGGCC CTGGGCCTGG GGGATATCCA GCGGTTTCCC
TTCGTCGAGC CGCCGGAGCA CAAGTTCGTC AACGATGGGT TCAAACTGCT GCACGAACTC
GGCGCGGTGA CGGAGGATCG CGAACTCACC GCCCTTGGAC GCCAACTGGC AAGACTGCCG
CTGGACCCGC CGGTAGGGCG GATGTTGCTG GCTGCCCGCG AGCAGGGGGT GCTGGACGAG
GTGCTGGTGA TCGCCGCCGC ACTCTCGGTC CAGGACCCGC GTGAGCGGCC CCTGGACGCC
CAGCAGGCCG CCGATCAGGC GCACGCCCAG TGGCGGCACG GGAAGAGTGA CTTCCTCTCG
CTGGTGCTGC TCTGGCAGGA CTACCACCGC CAGAAGCGCC GGCTCAGTAA CCGCCAGCTT
CGCCAATGGT GTCGCGAGCG CTTCCTGAGC CCGCACCGGA TGCGCGAGTG GCTGGATATC
CACCGCCAGA TCCGAGAGCT GGTGAGTGGC CTGTCCGGCG GCGCGGACCG CAAGGGCGCA
GGGGGCGGGC CGGGCCGGCC CCTGCGCTCC ACCGGGAGCG AAGGGGCGGC CGCCTCGCCG
CTGGCCCGCC CGCACACCGT GACCACGGAG CAGTGCGCCG AGTGGCTGGA TACCCACTAT
GAGGCCCTCC ACCGCGCGCT GCTCGCGGGA TTGGTCAGCA ATATCGCACA ACACCATGAA
AACAAGGAGT ATCTCGGTCC GCGCGGGGTG AAGCTGATGA TCTTCCCAGG TTCCGGCCAG
TTCAAGCGTA ACCCCAAGTG GATCGTGGCC GCGGAGTTCG TCGAGACCAG TCGGCTGTTC
GCCCGGACGG CGGCGGAGGT GAAGCCGGAG TGGATCGAGC AGACCGCGGC CCACCTGGTC
AGTCGCAGCT ATGCCGAGCC CCACTGGGAG AAGAAACCCG CCCAGGTGGC CGCGTACGAG
AAGGTCACCC TCTACGGTCT GGTGCTCGCC AGTCAGCGCC GGGTCAACTA CGGCCCCATA
GACCCGCCGG TGGCCCGGGC CATCTTCATC CGGGAGGCGC TGGTTCAGGG CGAGTACCGC
ACCCGGGCCC CGTTCTGGGA GCACAACCGG CGGCTGATCG AGGAGATCGA GCGCCTGGAG
GCCAAGGCCC GGCGCCGGGA TGTGCTGGTG GACGAGGAGA CCCGCTTCCG GTTCTACGAC
CAGCGTATCC CCGAGGGCAT CTACAGCGGG GCCGCCTTCG AGCGCTGGCT CGGGGAGGTC
AGCCGGGATG ATCCAAAGCG CCTGCACATG AGCCGTGAGG CGCTGATGCG TGACGACGCC
GATCCGGTCT CCGGTGAGGC CTACCCGGAC CGACTGCGCC TGCCCGGCGG CTTGGAGCTG
CCGCTGGAGT ACCACCTGGA GCCGGGCAGC GAGCTGGACG GGGTGGTGGC GCGGGTGCCG
GTGGCGGCCC TCAACCAGTT GCGCCCGGAG CCGTTCGAGT GGCTGGTCCC CGGCCTGGTG
CACGAAAAAG TGGTGGCCCT GATCCGGGGG CTGCCTAAGG CCATCCGGCG CAACTTCGTC
CCGGCGCCCG ATTTTGCCCG CGCCGTGCTC GAGGCCATTC CCCATGGCGA GGGGTCCCTG
ACCGATGCGG TGGCGCGCCA GCTCAAGCGG ATGACCGGCG TGGACATTCC CCCGGGTGCG
CTGGATGCGG TGGCCCTGCC CGAGCACCTG CGCATGCACT ACCGCGTGCT CGATGAACAG
GGCAACACCC TGCGTACGGG CAGTGACTTG GCGGCCCTCC AGCAGGGGCT GGGGGATCAG
GCCAGTGAGA GCTTCTCCGC CTCCGGCGGC GGGGCCTCGG AATGGACCCG CGAGGGCATC
ACGACATGGG ACTTCGGCGA TCTGCCGGAG GCCGTTGAGA TCGGGCGTAA CGGGCTGACC
ATCCGCGGAT ACCCGTGTCT GGTGGACGAG GAGAGCTCGG TCCGCCTCAC CCTGGCTGAC
AGTCCCGATG AGGCGGAGCG CCAGCACCGG GCCGGCGTAC GCCGCCTGTA TATGCTGGCG
CTGCCCCAGC AGGTGCGCTA TCTCCGCCGG GGGCTGCCGG GCCTGGACCG GCTGCGTCTG
GCCTACCGCG GTCTCGGGTC CGACGAGGAT CTGAAGCGGG AGCTGGTCCA TGCCGCCGTC
GACCGGACCT TCCTCGGCGA CGCCCCGCCG CGCACGGAGG CGGCCTTCCG GCAGCGCCTG
GAACGGGGCC GGCCGCGACT GGTGGAGAAC GCCCAACGGC TGGCGGAGGG GCTGGAGGAG
GTGCTGGGAC GCTACCAGGC CATCCGCAAA GCCCTGAAGC AGTTCAACGC CCTGGCACTG
ATGGACAGCC TCAAGGACCT GCAGGAGCAC TTGGAATGCC TGGTCTACCC GGGCTTTCTC
CAGCAGACAC CGCCGGAGTA CCTGGCCGAG TTGCCCCGCT ACCTGCGGGC CCTGGAGCGG
CGGGTGGAAA AGCTGCGGCA GGACCCGGGC CGGGATCGTA CGCCTCTGCG CAGTATCCGG
CCCTGGTGGG AGCGCTGGCG TGAGCGCCAG AGTCGCCGGG AGGCCCAAGG CAAACCCGAC
CCTGCCCTAG AGCGCTTCCG CTGGCTGCTG GAGGAGTACC GCGTCTCGCT CTTTGCGCAA
GAGGTGGGGG CCCGGGAAAA GGTGTCAGAG AAGCGCTTGA AGGCGGCCTG GAAGGAGGTG
GCCTGA
 
Protein sequence
MTARARRRNL PDALRQLRPR IDRAFGPARP ALRKRLAGLE RRAHDGKPFD KGLVKLERDI 
AVACQRAETR AANLPSPRFD PSLPVNQRLD DLREAIRDHQ VVVICGATGS GKSTQIPKIC
MALGRGVHGW IGHTQPRRLA ARTLAQRISD ELGTALGEAV GYKVRFTDQV SERTHLKLLT
DGMLLAEIQR DRHLDAYDTL IIDEAHERSL NIDFILGYLK RLLPRRPDLK VIITSATIDP
ERFSKHFDEA PILEVSGRTY PVEVRYRPMV DDEDERDEDL PGAVVEAVHE LAREPGQGDV
LVFLSGEREI RECTEALRKK HPPHTEVLPL YARLSAAEQQ RVFNPKGGGR RVVLATNVAE
TSVTVPGIRY VVDSGYARIN RYSYRTKVSR LPIEPISQAS ANQRAGRCGR EAPGVAIRLY
SEEDFAGRSA FTDPEIQRTN LAAVILQMKA LGLGDIQRFP FVEPPEHKFV NDGFKLLHEL
GAVTEDRELT ALGRQLARLP LDPPVGRMLL AAREQGVLDE VLVIAAALSV QDPRERPLDA
QQAADQAHAQ WRHGKSDFLS LVLLWQDYHR QKRRLSNRQL RQWCRERFLS PHRMREWLDI
HRQIRELVSG LSGGADRKGA GGGPGRPLRS TGSEGAAASP LARPHTVTTE QCAEWLDTHY
EALHRALLAG LVSNIAQHHE NKEYLGPRGV KLMIFPGSGQ FKRNPKWIVA AEFVETSRLF
ARTAAEVKPE WIEQTAAHLV SRSYAEPHWE KKPAQVAAYE KVTLYGLVLA SQRRVNYGPI
DPPVARAIFI REALVQGEYR TRAPFWEHNR RLIEEIERLE AKARRRDVLV DEETRFRFYD
QRIPEGIYSG AAFERWLGEV SRDDPKRLHM SREALMRDDA DPVSGEAYPD RLRLPGGLEL
PLEYHLEPGS ELDGVVARVP VAALNQLRPE PFEWLVPGLV HEKVVALIRG LPKAIRRNFV
PAPDFARAVL EAIPHGEGSL TDAVARQLKR MTGVDIPPGA LDAVALPEHL RMHYRVLDEQ
GNTLRTGSDL AALQQGLGDQ ASESFSASGG GASEWTREGI TTWDFGDLPE AVEIGRNGLT
IRGYPCLVDE ESSVRLTLAD SPDEAERQHR AGVRRLYMLA LPQQVRYLRR GLPGLDRLRL
AYRGLGSDED LKRELVHAAV DRTFLGDAPP RTEAAFRQRL ERGRPRLVEN AQRLAEGLEE
VLGRYQAIRK ALKQFNALAL MDSLKDLQEH LECLVYPGFL QQTPPEYLAE LPRYLRALER
RVEKLRQDPG RDRTPLRSIR PWWERWRERQ SRREAQGKPD PALERFRWLL EEYRVSLFAQ
EVGAREKVSE KRLKAAWKEV A