| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1623 |
|---|
| Symbol | |
|---|
| ID | 4269355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1854338 |
|---|
| End bp | 1855738 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638126380 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_742459 |
|---|
| Protein GI | 114320776 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG GCTTCACCCA CCTCCCCATG ACCGGCCTGG TGATCGCCCT GGCGGCGGTG
GCGCTGGTTA CCTTGCTGAT CGCCCCCCGG GTCAGTACCG CCAACGGGTT CTTCCGCGGT
TTCGCCGACG CGGGCCAGCC GCCCGGCGTG CTCACGCTCA CCCTCTCCCA GGTCACCACC
TGGATCTTTG CCCGCTCATT GCTCAATGCG GCCATCCTGG GTTATTTCTT TGGCATCGCC
GGTGTGCTCG CCTACACCGC CTACTACGGC TCCTTTGTCA CCGGCTGGCT GATCATCGAT
CGCCTTCGCT TCCGCTACGG CGCCTCCAAT CTGCAGGGTT TCATGAGGGC CCAGTATGGC
GGGGTGGGGA CCTTCTGCCT GAACGGACTC CTGGCGCTGC GCCTGGTCAG CGAGGTGTTC
GCCAACCTGC TGGTCGTCGG GATCGTCTTC GGCGCCGCCG GCAGCGCCGG CAACACCACC
GCCATGCTGT CGGTGGCCGC CCTGACCCTG GTCTATTCCC TCACCGGCGG GCTCCGGGCG
TCGCTGCGAA CCGATGTCCT GCAGATGGTG CTTTTGATCG GTCTGCTCGC CGCCCTCGTG
GTGGTCATGC TCCTGCATCC GCTCTTTGAC CCCGGGGCGC TGGCGGTCAG CAGCCCCGGG
ATCGACAACC CGGGCTGGAT CCTGCTGGCG GTCGCGGGTC TCCAGGTGCT CAGCTACCCC
ATGCATGACC CCGTCATGAT GGACCGCGGG TTCCTCGCCG ACCGCCGCAC CACACGGCGC
AGTTTTCTGC ACGCCTTCTG GCTCTCGGCG GTGTGTATCC TGGCCTTCGG GCTGCTGGGG
GTTTTCGCGG GCCTGCATCG CCTGGAGGGC GAAACCGTGC TGCTGACGCT GGACCGGCTG
ATGGGTACCC CCGTGATGTT TCTCCTGGCG GTGGCGCTGG TCCTGTCGGC CGCCTCGACC
CTGGACTCGA CCTTCTCCAG CGCGGCCAAA CTCAGCATCG CCGACATGGG ACTGGCCCGG
ACCACACCCC GCAACGGCCG GATCGCAATG CTCCTGTTCT GCCTGGGCGG GCTGCTACTG
GTGCTGTTCG GCACCGACGA CCTGTTCGCC GCCGTGGCCG TCAGTGGAAC CGCGTCGCTG
GCGCTCACAC CGGTCATCGC CTTCTCCCTA CTGGCCGGCT GGCGGCTTAG CCGGGCCAGT
CTGCTGACCT CCTTTACGCT GGCCTTCACG GGCGCTGTCG TCTACTTCCT GGAGACCTCC
GGGCATATCG ACCTGCTGAC CCCCCTGACC GGGCTGGAGC ACGACTACAG TAAGCTGCTG
GCGATCACGG TCACCATCCT GGTTCTTGCC ACCGCGGCGG CCTGGCTTGG CCGCCAGGGC
CGCATGGAGG TCGTGAAATG A
|
|---|
| Protein sequence | MSDGFTHLPM TGLVIALAAV ALVTLLIAPR VSTANGFFRG FADAGQPPGV LTLTLSQVTT
WIFARSLLNA AILGYFFGIA GVLAYTAYYG SFVTGWLIID RLRFRYGASN LQGFMRAQYG
GVGTFCLNGL LALRLVSEVF ANLLVVGIVF GAAGSAGNTT AMLSVAALTL VYSLTGGLRA
SLRTDVLQMV LLIGLLAALV VVMLLHPLFD PGALAVSSPG IDNPGWILLA VAGLQVLSYP
MHDPVMMDRG FLADRRTTRR SFLHAFWLSA VCILAFGLLG VFAGLHRLEG ETVLLTLDRL
MGTPVMFLLA VALVLSAAST LDSTFSSAAK LSIADMGLAR TTPRNGRIAM LLFCLGGLLL
VLFGTDDLFA AVAVSGTASL ALTPVIAFSL LAGWRLSRAS LLTSFTLAFT GAVVYFLETS
GHIDLLTPLT GLEHDYSKLL AITVTILVLA TAAAWLGRQG RMEVVK
|
|---|
| |