Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1619 |
Symbol | |
ID | 4269351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1847467 |
End bp | 1849365 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638126376 |
Product | diguanylate cyclase with PAS/PAC and GAF sensors |
Protein accession | YP_742455 |
Protein GI | 114320772 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.702165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCA CCCTGCTCGT TATCGGGCTG ATCGCCACGG TCCGGTTCAG GGCCCGTCAC GACGCTGGCC GTGACGTGGG CAACCAACCC CAGGCACTTC CCGATGAACC CGCGCTCTTT CAGAGACTTG CCGGGAACAC CTCGGCCGGA CTCTTCCTGG CCCGGGCAGA TCGCCTGATC GCGGTCAACC CCGCGCTCTG CCGTATCCTG CGGTGCCCGC CAGAGCAGCT GACCGGGGCT GAATGGCGGC CGCTGATCCA TTCCGACCAC GCCGATGAGG TCGAGACCCA CGTCAGCGCC CGCCTGCGCG GGCAACCGGC CAGCCCACTG CACCCGATCA GGGTCCAGCG GGGTGATGGC ACCACCCGCT GGGTGGAGCT GAGCCTGGAA CCGGTGGCCC TGGGCGGGGA TCCCGCCATG GTTGGCACCC TCGTCGACAT TGACCGCCAC TGCGCGCTAC AACAAGAGCT CCTGCTGAGT GAGAGGAAAT ACCGACAACT CGTTGAAAAC GTAAATGATA TAATCTATAC ATTGACACCG GATGGACGCC TGAGTTACGT CTCCCCCAAC TGGCCGGAGC TCCTCGGCCA CCCGGTCGAT CAGGTCATCG GCCGGCCCAT TGCCCGGTTC GTGCACCCGG ACGACCTCCC CGGCTGCGAG GAGTTTCTCA GGCGCCTGTT CCTCACCGGC AAGAAGCAAA GCGGCATTGA ATACCGGGTG CGGCACAGTG ACGGTCACTG GCGCTGGCAC ACCGCCAATG CTTCACCCAT CACCGGCGAC GACGGCACCG TCATCGCCTT TGTGGGTATC GCCCGCGATA TCACCGCCAG GAAGGGCATG GAGGCCGAAC TGGTCTACCA GCTTCGGTTT AACGAGCTGG TCGCTGAACT CTCCACCCGG TTCGTGCGCA GCCCTGCCGA GGAGACCGAT GCCCGGATCG ACGATCTGCT TCGGCGGGCG GGCACCCTGT TCAATGCGGA TCGGGCCTAC CTCTACCTCT TCTCCGACGA TGGCGAGACC ATGAGCAACA CCCACGAGTG GTGTGCGCCC GCGGTCCCCT CGCTGTTGGA GGACAGTCAG CGGATGCCCG TCGCCCGCTA CCCGTGGTGG CAGCGACACA TGACGGCGCT GCGCGACCAG CACCAGGTGT TGTTCATCAA TGACGTCTCA GCGCTGCCCG CCGAAGCAGC GGCGGAGCGG GCGCTGCTGG AGGGGCAGCA GGTGCGCACC CTGGTCTGTG CCCCGGTGGC GACGCCGGAT CGGGTCATCG GTTTTTTGGG GTTCGACTCG CTGCGTCCCA AGGAGTGGCG GAAGGATCAG GGCGACCTGT TGGTCGTCCT CGGCAATCTC CTGGCCGCGG CACTGGTGCG ACGGCAACTG GAGTTGGATC TGCGCAACCT GTCGGTGACC GACCCGCTCA CCGGCCTGTT CAACCGGCGC TTCCTGCGGG CGCGCCTGCT GGCGCTCATT GAGGAGTATG AGCGCCACGG ACACCGGTTC TGTGTCAGCC TGGTGGACCT GGATCACTTC AAGGCCCTGA ACGACCGTCA TGGCCATCTG GCCGGTGACC GGATCCTGCA GGGCTTCGCC AACATCCTGC GGGACAATCA CCGGGTGTTC GACATCGTCG CCCGCTACGG CGGTGAGGAG TTCGTGGTGA TCCTGGTGGG AACCGAAATC GGGCAGGCGC GACGGGTGAC TCGCCGCGCC CTGACAACCA CCCGCAACCA TGACTTCCGT TTCAACGAGA CCCCGCTGTC GATCACCGCC AGCGCCGGTC TCGCTGATAT CGCGGAGTTG CCCGAAGACC ACCGCACCGT GGAGCATCTC CTGCAACTCG CGGACCACCG CCTCTATCGG GCCAAGCAGC AGGGCCGCGA CTGCCTGGTG GCCGACTAG
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Protein sequence | MASTLLVIGL IATVRFRARH DAGRDVGNQP QALPDEPALF QRLAGNTSAG LFLARADRLI AVNPALCRIL RCPPEQLTGA EWRPLIHSDH ADEVETHVSA RLRGQPASPL HPIRVQRGDG TTRWVELSLE PVALGGDPAM VGTLVDIDRH CALQQELLLS ERKYRQLVEN VNDIIYTLTP DGRLSYVSPN WPELLGHPVD QVIGRPIARF VHPDDLPGCE EFLRRLFLTG KKQSGIEYRV RHSDGHWRWH TANASPITGD DGTVIAFVGI ARDITARKGM EAELVYQLRF NELVAELSTR FVRSPAEETD ARIDDLLRRA GTLFNADRAY LYLFSDDGET MSNTHEWCAP AVPSLLEDSQ RMPVARYPWW QRHMTALRDQ HQVLFINDVS ALPAEAAAER ALLEGQQVRT LVCAPVATPD RVIGFLGFDS LRPKEWRKDQ GDLLVVLGNL LAAALVRRQL ELDLRNLSVT DPLTGLFNRR FLRARLLALI EEYERHGHRF CVSLVDLDHF KALNDRHGHL AGDRILQGFA NILRDNHRVF DIVARYGGEE FVVILVGTEI GQARRVTRRA LTTTRNHDFR FNETPLSITA SAGLADIAEL PEDHRTVEHL LQLADHRLYR AKQQGRDCLV AD
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