| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1618 |
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| Symbol | |
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| ID | 4269350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1846372 |
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| End bp | 1847319 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638126375 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_742454 |
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| Protein GI | 114320771 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.465864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCA AACAGACCCC CGCCACCCCC TCCGGCCGGT CGGTGGCCGG CACCCTCTGC
GGCGGCGCCG CACGGCGCTG GCTGTCCGTG CATGAGCATC AGGGCCCCGA CCCTGAGCCC
GGGGACAGCG AACTGTTCCG GAATATCGTG CGCTATTCCA GCGATGCCAT CGTGGTCATC
GACGAGGCGG GCACGGTGCG CTACGCCAAC CCGGCGGCCG GACGGCTTTT CGGGCGCGCA
GTGAATGCCC TGGTCGGCCG CCCGTTTGCG CTGTCGCTCG GTGGCAAGCG GGCGGAGGTG
GACATCGTCC GCCCCAAGGG CGATCTGGTG GTGGCCGAAA TGCACACCGC CCGCATCCCC
TGGGGTGATC AGGTGGCCCA GCTTGCGATA CTTCGGGACA TCACTGAGTG GCGGGAGACC
CTCTCGCGGC TGGACCACCT GGCCCGCTTC GATGCCCTCA CCGACCTACC GAACCGCTCG
GAATTACAGC GTCAACTGCG CAAGGCGCTG GCCCGGGCCA GTCGACGCAG CGCACCGCTG
GCGGTGCTGT TCCTGGACCT GGACGGCTTC AAGGTGGTGA ATGACACCCT GGGCCATTCC
GCCGGCGACC GCCTGCTGCG GGAGGTGGCC ATCCGCCTGC ATGCCGCCAC CCGAACCGGC
GATCTCCTGG CGCGCATCGG AGGCGATGAG TTTGTCCTGG TACTTGAGGA TTTCCACTGT
GCCGAGGACG CGGGCCAGGT GGCCAGGAAG CTCATCCGCA CCCTGGAGCG CCCGTTCAAA
CTGGACGGCA CCGAGCTGCG TCTGGGTGCC AGCATTGGTA TCGCGCGCTA TCCGGACGAT
GGCAGCGGCC CGGCAGAGCT GGTCCGGGCG GCGGACCACG CCATGTACCG GGCCAAGGCC
GGCGGCCGGG GCACCTACCG CTACGCCAAT GCACCCCATG AAGACTAG
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| Protein sequence | MQIKQTPATP SGRSVAGTLC GGAARRWLSV HEHQGPDPEP GDSELFRNIV RYSSDAIVVI
DEAGTVRYAN PAAGRLFGRA VNALVGRPFA LSLGGKRAEV DIVRPKGDLV VAEMHTARIP
WGDQVAQLAI LRDITEWRET LSRLDHLARF DALTDLPNRS ELQRQLRKAL ARASRRSAPL
AVLFLDLDGF KVVNDTLGHS AGDRLLREVA IRLHAATRTG DLLARIGGDE FVLVLEDFHC
AEDAGQVARK LIRTLERPFK LDGTELRLGA SIGIARYPDD GSGPAELVRA ADHAMYRAKA
GGRGTYRYAN APHED
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