| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1598 |
|---|
| Symbol | |
|---|
| ID | 4268296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1827466 |
|---|
| End bp | 1827915 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638126356 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_742435 |
|---|
| Protein GI | 114320752 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.26803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTTC TTTCATCCGT ACCGCCAGAG GAGGCCCCGG TCATGCTGAC CAAGGAACAG
CTGCTCGCCA GCCCACCGGA AGACTACATG AACGACGAGC AGTTGGCCTA CTTCCGCCAA
CTGCTGGAGA AGGAGCGCAA GGAGATCCTT GAGGGGCTGG AGAGCACCAC CCGCCACCTG
CGCGACGACA ACAGCCGCGA GCCGGACGAG CATGACCGCG CGACGCTGGA GGAGGAGTAC
CAGCTCGAGC TGCGCATCCG GGAGCGGGAA ACCCGCCTGC TGCGCAAGAT CGACCAGGCC
CTGCGTCGGA TCGAGACCGG CGAGTACGGC TACTGTGAGG TGACCGGCGA GCCCATCGGG
ATTCCGCGGC TCCTGGCACG CCCCACCGCC ACGCTCAGCA TCGAGGCCAA GGAGCGCGCC
GAGGTGGAGG AGCGCACCCG CCGCTCCTGA
|
|---|
| Protein sequence | MLVLSSVPPE EAPVMLTKEQ LLASPPEDYM NDEQLAYFRQ LLEKERKEIL EGLESTTRHL
RDDNSREPDE HDRATLEEEY QLELRIRERE TRLLRKIDQA LRRIETGEYG YCEVTGEPIG
IPRLLARPTA TLSIEAKERA EVEERTRRS
|
|---|
| |