| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1578 |
|---|
| Symbol | |
|---|
| ID | 4270600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1807245 |
|---|
| End bp | 1808831 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638126335 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_742415 |
|---|
| Protein GI | 114320732 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.24195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC GCAACGACTA CGACAGCCTG CCCATGAACT GGGTGGGAGA CTGGGCCGGG
CGGCGCGCCG CACTGACCCC GGACAAACCC GCCGTGCATG ATCCGGACGC GGGGCCGCCG
CTGACCTTCG CCCAGATGAA TGCCCGTGCC GACCGCACCG GGCGGTGGCT GACCGACACC
CTGGGCCTGG CCCCGGGCGA GCGCTTCGCG GTGCTTTGCC GCAACCGGCT GGAGCTGGTG
GACCTCTACC TGGCCTGTGG CAAGACCGGG GTGGTGCTGA CACCACTGAG TTTCCGCCTG
GCCGCCCCCG AGTTGAACGA CCTGCTGGCC CGCATGGCGC CCAGCGCCTT TATGCACGAG
GAGGCGCTGG CGGCCCTGGC CGAGTCGCTG GATCTGCCGC CCAGCGTACG CCGCCGGCTG
GCCCTGGACG AGGCGGGGGA GGTCTGGCAG CGCCGGGTGC TCACTTCGCC CGAGCAACCG
GCCAACCGCC CCCTGCCCAT GCAGGCGCCC TATCTCTATA TCCACACCGG CGGCACCACC
GGCAAGCCGA AGATCTGCCC CATCAGCCAC CGGCAGATGA CCTGGAACGC CATCGATATC
CTGGCGACCT CCGGCGGGGC GCTGGGGCCC CAGCGCGAGC TGGTCACCTT CCCCTTCTTC
CACATCGGCG GTTGGAACAC CCTGACGCCG GTCTACTACG CCGGCGGGTA CAGCGTCCTG
ATGCGCGAGT TTGATCCGGG GCGGGCGCTG GAACTGATCG CCGCGGAGGG CATCACCCAC
TTCGGCGGGG TCGAGGCCAT GCTCCAGTTG ATGAGCAAGC ACCCCGCCTT CGCCGATACG
GATCTCTCCA CCCTGGAAGG CATCACCACC GCCGGGGCGC CCTGCGGTGA GGCCACCATG
CGCCCGTGGG TGGAGCGCGG CATCCCGGTG GCCCAGTCCT ACGGGCTGAC CGAGGGCGGG
CCGTCCAACT TCATGCTGGT CACCGACGGG CTGGAGGCCG ATGGCATCTG GGAGCTGCGC
CACAGTATCG GGCAGAGCAT GTTCCACACC GACTACCGCA TCACCCATCC GGACGAGGGC
ACGGTAGTGG CCCCGGGCGA GACGGGGGTG CTGGAACTGC GCAGCCCGCA CTGTTTCGAC
GGTTATCTCG ACGACCCCGA CCGCACGGAT CGGGTGTTCC GGGAGGGCGG CTGGGTCTGG
ACTGGCGATA TGGCGCGGGC CGACGCCTGC GGTCGGGTCA CCCTGGTGGG TCGGGCCGAC
AACGTCTTCG TGAGCGGGGG TGAGAACATC GCGCCCGAGG AGATCGAGAC GGTGCTCAAT
ACCCACCCGG GGGTGAGCGC CGCCGCCGTG GCCGGCGTGC CCCATCCCCA CTGGGGACAG
GTGCCCGGGG CCCTGGTGGT CACCAACGGC TCGCCCCCCG GGGTGGCCGA TCTGGAGGCG
CACGCGGCCC TGCGGCTGGC CCGTTTCAAG CGCCCCCGCC ACTGGCGCTT CGTCGACGCC
CTGCCGCTGA CCGGTGCCGG AAAGATCGAT CGCGCCCGCG TGGCGGAGAT GCTGAAACAG
GATGAAAATA GTGATGCAGG TAACTGA
|
|---|
| Protein sequence | MSERNDYDSL PMNWVGDWAG RRAALTPDKP AVHDPDAGPP LTFAQMNARA DRTGRWLTDT
LGLAPGERFA VLCRNRLELV DLYLACGKTG VVLTPLSFRL AAPELNDLLA RMAPSAFMHE
EALAALAESL DLPPSVRRRL ALDEAGEVWQ RRVLTSPEQP ANRPLPMQAP YLYIHTGGTT
GKPKICPISH RQMTWNAIDI LATSGGALGP QRELVTFPFF HIGGWNTLTP VYYAGGYSVL
MREFDPGRAL ELIAAEGITH FGGVEAMLQL MSKHPAFADT DLSTLEGITT AGAPCGEATM
RPWVERGIPV AQSYGLTEGG PSNFMLVTDG LEADGIWELR HSIGQSMFHT DYRITHPDEG
TVVAPGETGV LELRSPHCFD GYLDDPDRTD RVFREGGWVW TGDMARADAC GRVTLVGRAD
NVFVSGGENI APEEIETVLN THPGVSAAAV AGVPHPHWGQ VPGALVVTNG SPPGVADLEA
HAALRLARFK RPRHWRFVDA LPLTGAGKID RARVAEMLKQ DENSDAGN
|
|---|
| |