| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1542 |
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| Symbol | |
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| ID | 4270547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1762498 |
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| End bp | 1765812 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638126300 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_742381 |
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| Protein GI | 114320698 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.546825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTC GTAGACGCAA CAACCGGCCG CAGGTGCCGT TCGCCTACAA GCTGGTGCTG
AACCAGTGGC TGTTCAGCCT GTTTGGGCTG GCGTCCACTG ACGGCTTCTT TACCTGGAAC
GGAAAGCGCC TGCCGTTACT GGAAGCCTTC AAGCAGAAGT TTCAGTTGAG CGAAGACAGC
GCCGGCGGGT TGGACGAGAA CAACATCCAC CGCTTCCACA CGGCCCTGAC CAACCAGACC
GACCCGCTGC CCGAACTGCC GGCCGATCTA TTGCTCGAGT ATGACCAGAA TATCGTCCGT
CATACCCAGC GTTTGAACGA GCGCCGGCTG GCGCGCGGCG AAGAGGCTAT CGCCTGGAAG
TACTTCCAGT ACCTGTCGCT GCTGTTCACC GAAATCTATC TGGACCGTTA TTTCTCCGAT
GCGGATGCCT TGCTGGCCTC GATCAACGAA CAGATTGAGC GCTACAACGC GGACAAGCCG
GAACCGGACC AGGTCCCAAA TCTGGATCCG GAAGGCGATG TCACCGGGCA GTTGAACAAG
CTGGCCTTCT GGAGCGCCAC CGGCTCCGGT AAGACGCTGA TCATGCACGC CAATATCCTG
CAATATCAGC ACTACCTGAC CAAGCACCGC CGCCGCCGCG AGCTCAACCG GATCATCCTG
TTGACGCCCA ACGAAGGGTT GAGCCAGCAA CACCTGCGAG ATTTCCAGGC TGCCGGGATC
GAGGCGGAGT TGTTCGACAA GAACGGTCGC GGGCTGTTCG CCGGGCAGGC TGTCGAGATC
ATCGACATCA ATAAACTGCG CGACGAGATG GGCGATAAGA CGGTTGCCGT CGATGCCTTC
GAGAACAACA ACCTCGTGCT GATCGATGAA GGGCATCGGG GTGCCAGTTC CGGTGAGACC
GGCACCTGGA TGCGCTTTCG CAATGCATTG TGCGAGCAGG GTTTTTCCTT CGAATACTCC
GCCACTTTCG GCCAGGCGGT AAAGCGCAGC TCCCAACTGG CGGCCCAGTA CGAGCGTTGC
GTGCTTTTCG ACTATTCCTA CAAGTATTTC TATGGCGACG GCTATGGCAA GGACTACCAG
ATCCTGAACC TGGACCCGCA GACCCAGGAA AACACTATGG AGGTTTACCT GGTGGCCTGC
TTGCTGTCTT TCTTCCAGCA GCTGCGCTTG TATCGCGAAC AGGCTGTGGC TTGCCGGCCG
TTCAATATTG AGAAGCCGTT GTGGATCTTC GTCGGCGGCC GGGTCACCGC GTCTCTTTCG
ACCAAGGATG CCTCCGACAT TGTTGAGATT CTGCGCTTTT TGGCGCGCTT TCTCGGTGAT
CGTGCCGGGA GTACGGCGCG CATCCGGCGG GTGCTGGAGG AAGGCTTGAT TGCTGCCGAT
GGGCGCAATC TATTTGCCCG GCGTTTTGCC TACCTGAACG GATTGGGGCT TTCGGCCGAG
CAACTGTTCG AGGAAGTACA GGCCAGCCTC TTCAATGCCG CAGGGGGCGG CGCGCTGCAC
GTGGAGAACC TGAAGGGTGT CCCGGGGGAA ATCGCTTTGC GCGTTGGCGA CAATGAGCCG
TTCGGCGTGA TCAATGTCGG CAATGACAGC AGACTGTGCT CGCTCTGTGA GAACGAAGAC
GGGCTGCTGG TCGGTGATCG GGATTTCAAG GGCTCCCTGT TCCAGTCCAT CAATGCTCCC
GATTCGTCTG TCAATGTACT GATCGGCTCC AAGAAGTTCA CCGAAGGCTG GAACAGTTGG
CGCGTCAGTA CCATGGGGCT GATGAATGTG GGCAGCACGG AGGGTTCGCA GATCATCCAG
CTTTTTGGCC GCGGGGTGCG CCTGAAGGGT TATGACGGCA GCCTGAAGCG CAGTGCCAGG
GTGAACCTCC CGGAGGATGT CGCGCGGCCA GGACACCTGC CGACACTCGA AACCCTGAAT
ATCTTCGGCA TCAAGGCCGA CTACATGGCC CAGTTCCGCG AGTTTCTCGA AGAAGAGGGG
CTGCCGTCTA ACGAGGAGCG TATCGAGTTC CTGCTGCCCG TGATTCGCAA CCTGGGTCAG
AAGCAGCTCA AGACCATTCG CTTGAAGAAG ACCATCAACG GGGTAAGTAC CCAGTTCGGT
GACGCCTTCA AAAAGCTCGG GCCAGTGCCG ACACTGGCCC GGCCCGATCC CGCGCAGGAG
GCGGCCACCC GGTATCTGCA AACCAATCCG GTTGTGCTGA ATTGGTATCC CAAGATCCAG
GCGATGCGCT CCAGTGGCGT CGGTGCCGTG GAGGAGGATC GTCAGCCGGA TCAGGGTGCC
CTGAGCAAGA GACACATCGC CTTTCTCGAC CTGGACGCGC TGTATTTCGA GCTACAACGC
TTCAAGGCTG AGCGGGCCTG GCACAACCTG AACCTGCCAC GGGATGTGTT GCCCGAACTG
CTGGCCGACC AGAGCTGGTA TCGGTTGCTA ATCCCGGAGT CCGAGCTGGC CTTCGATTCC
TTCGAGAAGA TTCACCTGTG GCAGGAACTC GCCGAGGCGC TGCTCAAGAA GTACTGTGAG
CGCTACTACT CGTTCCGCAA AAAGGAATGG GAGCTGCCAC ACCTGGAGTA TCGCTATCTG
GATGCCAACG ATCCGAACTT TCCTCAGGTC AATGAGGATT TCCCGGAGGG ATACCACCGC
ATCCTGGTGG AAGAGTCTCA GACCGAGATT GTCGCCAAGC TCAAGGAGCT CAAAGCACAG
ATTGATGCGG GCACGCTGAA ACCCTGGCAG TTTGGCGGCC TGCAAGCTAT TCCATTTGGT
CGCCACCTGT ACGAGCCACT GTTGCATCTG GCGGGCTCAA CCGTCGAGAT CAGTCCCGCA
CCCCTGAACC AGGGCGAGAG GCGCTTCGTG GAAGACCTGA GGGACTACTG TGACTCGAAA
CCGGCATTAC TGCAGGACAA GGAACTCTAT CTGCTACGTA ACCTGAGCAA GGGCCGCGGC
GTAGGCTTCT TTGAGGCAGG TAACTTCCAT CCCGATTTCA TCGTTTGGTT GATCGCTGAT
GGTCAGGAGT ACATCTCGTT CGTCGATCCC AAAGGGATTC GAAACCTCGG TGCCCAGGAC
CCGAAAATCC AGTTCCACCA GACCATCAAG GAAATCGAAG ATCGGCTTGG CGATTCAACT
GTGACGCTGA ACAGTTTCGT GATTTCCAAT ACGCCAGCGC ATGAGATGCG ATTGCTTTGG
GGGGTGGACA AGGCGCAGAT GGAAGCCTGG CATGTTCTTT TCCAGCAGGA GGACAAGGCC
AGTTATATCG ATTCGCTACT CGCCAAATCA CTTGAGCCTG TCAAGTCTCC CGCGAAGGGA
TCCGTTTCCA AGTAA
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| Protein sequence | MPPRRRNNRP QVPFAYKLVL NQWLFSLFGL ASTDGFFTWN GKRLPLLEAF KQKFQLSEDS
AGGLDENNIH RFHTALTNQT DPLPELPADL LLEYDQNIVR HTQRLNERRL ARGEEAIAWK
YFQYLSLLFT EIYLDRYFSD ADALLASINE QIERYNADKP EPDQVPNLDP EGDVTGQLNK
LAFWSATGSG KTLIMHANIL QYQHYLTKHR RRRELNRIIL LTPNEGLSQQ HLRDFQAAGI
EAELFDKNGR GLFAGQAVEI IDINKLRDEM GDKTVAVDAF ENNNLVLIDE GHRGASSGET
GTWMRFRNAL CEQGFSFEYS ATFGQAVKRS SQLAAQYERC VLFDYSYKYF YGDGYGKDYQ
ILNLDPQTQE NTMEVYLVAC LLSFFQQLRL YREQAVACRP FNIEKPLWIF VGGRVTASLS
TKDASDIVEI LRFLARFLGD RAGSTARIRR VLEEGLIAAD GRNLFARRFA YLNGLGLSAE
QLFEEVQASL FNAAGGGALH VENLKGVPGE IALRVGDNEP FGVINVGNDS RLCSLCENED
GLLVGDRDFK GSLFQSINAP DSSVNVLIGS KKFTEGWNSW RVSTMGLMNV GSTEGSQIIQ
LFGRGVRLKG YDGSLKRSAR VNLPEDVARP GHLPTLETLN IFGIKADYMA QFREFLEEEG
LPSNEERIEF LLPVIRNLGQ KQLKTIRLKK TINGVSTQFG DAFKKLGPVP TLARPDPAQE
AATRYLQTNP VVLNWYPKIQ AMRSSGVGAV EEDRQPDQGA LSKRHIAFLD LDALYFELQR
FKAERAWHNL NLPRDVLPEL LADQSWYRLL IPESELAFDS FEKIHLWQEL AEALLKKYCE
RYYSFRKKEW ELPHLEYRYL DANDPNFPQV NEDFPEGYHR ILVEESQTEI VAKLKELKAQ
IDAGTLKPWQ FGGLQAIPFG RHLYEPLLHL AGSTVEISPA PLNQGERRFV EDLRDYCDSK
PALLQDKELY LLRNLSKGRG VGFFEAGNFH PDFIVWLIAD GQEYISFVDP KGIRNLGAQD
PKIQFHQTIK EIEDRLGDST VTLNSFVISN TPAHEMRLLW GVDKAQMEAW HVLFQQEDKA
SYIDSLLAKS LEPVKSPAKG SVSK
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