| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1517 |
|---|
| Symbol | |
|---|
| ID | 4269073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1728708 |
|---|
| End bp | 1731149 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638126275 |
|---|
| Product | peptidase S16, lon domain-containing protein |
|---|
| Protein accession | YP_742356 |
|---|
| Protein GI | 114320673 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.30513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.334171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA TTCGGCCATT GTCCGCCGAC CAACTCTACC GCCCCTGCCG CGCCGACCAG
CTCGGCTTTC GCACCACCGA GGAGCTGGAG CGCCTGGAGC TGCCCTGTGG GCAGACGCGG
GCGCTGGAGG CGTTGGACTT TGCCACCGGC ATCCGCAACG ACGGCTTCAA CCTCTTCGTG
CTCGGGCCGG CTGGCGCGGG CAAGCGGGAG TGGGTCCAGC GCTTTCTGGA GCGCAAGGCC
GAGGCGCAGC AGCGGCCGTC GGACTGGGCC TATATCTACA ATTTCGACGC CCCCGATCAG
CCCCGGGCCC TGGCGCTGCC CGCCGGGGCC GGCCGGCGCC TGAAGCGGGA CGTGGACGAA
CTCACCGATG AGCTGCGCAA CTCCATCCCC GCCACCTTCG AGAGCGACGA GTACCAGTCC
CGGATCCAGG AGCTGCAACA GGCGGCGAAT CGTCGCCACC GAGAAGCAAT CGAACAGATC
CAACACGAGG CCGAGGAGCA GGGCATTGCC CTGCTGACCA CCCCCTCGGG GTTCACCTTC
GCCCCCAAGA AGGAGGGCGA GGTGCTGAGC GCCGAGGAGT TCCAGAAACT GCCCGAGGAG
GAGCGCAACG CCATCGAGCA GCGGGTGGAG CAGCTACAGG AGAAGCTCCA GCAGTCCATC
CAGCAGTTGC CCCAGATCCA GCGTGAGCTG CGCCAGCAGG TCCGGGAGCT CAATGAGGAG
ATGGTGCTGG TGGCCGCCGG GACCCCCATC CGCAATCTCA AGGACGCCTA CAGCCATATC
GAGGGGGTGG TCGCCCACCT GGAGGCAGTG CGCAAGGACA TCATCGAGAA CGTGGACGCC
CTGCAGGGGG ACAAGCATGG CCGCCACTCG GCGATGGAGG CGGTGCTGGA GCGCTACCGC
ATCAACCTCA TCGTCGATCA GTCGGCGCAG ACCGGCGCCC CGGTGGTGTA CGAGGACCTG
CCGCTGCACC AGCACCTGGT GGGGCGGATC GAGCACTACG TGCACCAGGG TGCGCTGATG
ACCGACTTCA CCCTGATCCG GGGTGGTGCC CTGCACCGGG CCAACGGTGG TTATCTGATC
CTGGATGCCC TGCGGGTGTT GCAACAGCCG ATGGCGTGGG AGAGCCTGAA GCGGGCGCTG
AGCGCCCACA CCGTGCGCAT CCAGTCGCTG GAGCGGCTCT ACGGCCTGGC CAGCACCGTC
AGCCTGGAGC CGGAGCCGAT TCCGCTGCAG CTCAAGGTGG CGCTGGTGGG CGACCGGTTC
CTGTACTACC TGCTGGCGGC CTACGACCCC GACTTTCTCG ATCTCTTCAA GGTGCAGGCC
GACTTTGAGG ACGACCTGCC CCGGACCGAC GAGAACCAGC AGGATTACGC CCGCATGCTG
GCCACCATGG CGCACCAGGA TAAGCTGCGC CCGCTCACCG CCGAGGCGGT GGCCCTGATC
ATCGAACAGG GCGGCCGGCT GGCCGATGAC CAGGAGAAGC TCACCGCCCA GGCACGGATG
CTGCGCGACC TGCTGGTGGA GGCCGACCAC TGGGCGGCCC GCGACGAGGC CGGGGCGATC
GATGCCGCCC ACGTGGAGCG GACTATCGAG CAGCAGCGCT ACCGGGCCGG GCGGGTGCGG
GACCGGACGC TGGAGCTGAT CCAGCGCGGT ACGGTCATGA TCGCCACTGA GGGCGAGGCC
ATCGCCCAGG TCAACGGCCT GTCGGTGCTG CAGCTCGGCG ACCAGGCCTT CGGCCGACCG
ACCCGTATCA CGGCCACGGC CCGGGCCGGC CGCGGCCAAG TGCTGGATAT CGAACGCGAG
GCCAAACTGG GCGGCAACAT CCACTCCAAG GGCGTGATGA TCCTGTCCCG CTACCTGGCA
ACGCGCTATG CCCGGGAGGG GGCGCTCTCG CTCTCGGCCA GCCTCGCCTT CGAGCAGTCC
TACGGCGGGG TGGAGGGCGA CAGCGCCTCG GTGGCCGAAC TCTGCGCCCT GGTCTCCGCC
ATCGGCCGGG CGCCGATCAG GCAGTCGCTG GCGGTGACCG GCTCGGTCAA CCAGCACGGC
GAGGTGCAGG CGGTCGGCGG CGTCAATGAG AAGATCGAGG GCTTTTTCGA GGTCTGCCGC
GGGGCCGGGA CCTTGGACGG GCAGGGCGTG CTCCTGCCCG AGGCCAATGT GCCCCACCTG
ATGCTGCGCC GGGAGGTGCG CGAGACGGTG GCCGCCGGGC AGTTCCATGT CTATCCCATC
CGCCATGTGG ACCAGGCCCT GGAGTTGCTG ACCGGGCTGC CGGTGGGCGA GGCGGACGCC
GAGGGGGGCT ATCCGGAGGG CAGCTTGAAC CGCCGGGTGG CGGACCGGTT GGAGGCCTTC
GGCCGATCGG TGCGCCGGCA GAGTCAGGAC GACAACGGCG AGGGGGGCGG CCCCCGGACG
GAGGAGGGTG ACACCTCGCC GCGTGGGGGT GACGATGAGT GA
|
|---|
| Protein sequence | MTPIRPLSAD QLYRPCRADQ LGFRTTEELE RLELPCGQTR ALEALDFATG IRNDGFNLFV
LGPAGAGKRE WVQRFLERKA EAQQRPSDWA YIYNFDAPDQ PRALALPAGA GRRLKRDVDE
LTDELRNSIP ATFESDEYQS RIQELQQAAN RRHREAIEQI QHEAEEQGIA LLTTPSGFTF
APKKEGEVLS AEEFQKLPEE ERNAIEQRVE QLQEKLQQSI QQLPQIQREL RQQVRELNEE
MVLVAAGTPI RNLKDAYSHI EGVVAHLEAV RKDIIENVDA LQGDKHGRHS AMEAVLERYR
INLIVDQSAQ TGAPVVYEDL PLHQHLVGRI EHYVHQGALM TDFTLIRGGA LHRANGGYLI
LDALRVLQQP MAWESLKRAL SAHTVRIQSL ERLYGLASTV SLEPEPIPLQ LKVALVGDRF
LYYLLAAYDP DFLDLFKVQA DFEDDLPRTD ENQQDYARML ATMAHQDKLR PLTAEAVALI
IEQGGRLADD QEKLTAQARM LRDLLVEADH WAARDEAGAI DAAHVERTIE QQRYRAGRVR
DRTLELIQRG TVMIATEGEA IAQVNGLSVL QLGDQAFGRP TRITATARAG RGQVLDIERE
AKLGGNIHSK GVMILSRYLA TRYAREGALS LSASLAFEQS YGGVEGDSAS VAELCALVSA
IGRAPIRQSL AVTGSVNQHG EVQAVGGVNE KIEGFFEVCR GAGTLDGQGV LLPEANVPHL
MLRREVRETV AAGQFHVYPI RHVDQALELL TGLPVGEADA EGGYPEGSLN RRVADRLEAF
GRSVRRQSQD DNGEGGGPRT EEGDTSPRGG DDE
|
|---|
| |