| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1503 |
|---|
| Symbol | |
|---|
| ID | 4269860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1716242 |
|---|
| End bp | 1717246 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638126261 |
|---|
| Product | ribosome small subunit-dependent GTPase A |
|---|
| Protein accession | YP_742342 |
|---|
| Protein GI | 114320659 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.439289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.479841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCCG CCATGTGGGC CTGCAGTCCC GTACGCACCG TGGCACAATC CCGCAGCAGG
AGGCACCAGC CACGCCCTGA CCACAACCAC CCGGGGGACG GAGAACCACC AGTGAGCCCA
GCAGCCGGAC AAACGGGCCG GGTCGTCAGC CACCACGGCC GCGAGAGCCT GGTCGAAGAC
CGGGAGGGCC GCCTGTATCG CTGTCTGTCG CTAAAGCGGG TCGGGCGCCC CCTGTGCGGC
GACTACGTGG ATTGGCACCC GGAGACGGAC GAAACCGGGG TGATCGACCG CATTCATCCG
CGCCACGGCG TCATCGCACG CACCGCCTAC AACGGCCGGG TGCAGGCCAT CGCCGCCAAC
GTCGACCGCA TGGTGGTGGT TTCCGCGTTG GAGCCGCCGC CGGACCCGGA ACTGATCAAC
CGCTACCTGG TGCTGGCCCA CCACCTGGCG GTGGAACCGT TGCTCTGGCT CAACAAGACC
GACCTGGACC CGGACCAGGC GGAGCGGCTG CTCGCGTCGG TCTTCGCCGG CCACCGGGCC
CGGGGGGTGG CGGTAATGGC CGGCAGTCCC CACACCGGCG AGGGCATGGA GACGCTGCGG
GAGGCGCTGC GGGAGGGCAC CAGTGTGCTG GTCGGCCTAT CCGGCGTGGG CAAGTCGTCG
CTGATCAAGG CCCTGCTCCC CGACCGTGAC CTGCGCATTG GCGATCTCTC GGCGCGGAGC
GGTCTGGGCC GCCACACCAC CACCGAGACC ACCCTCTACC ACCTGCCCGA GGGGGGCGAT
CTCATCGACT CCCCCGGTAT CCGTGCCCTG CGCCTGGCCA ACATCCCGCG CGAGGCGTTG
CAACCCGCCT TTCCGGAGAT CGCCCGGGTG GCCAGCGGCT GCCGGTTCCA TAACTGTCAG
CACCGCAACG AGCCCGGTTG CGCGGTCCGC GCCGCCGTCG AGCGGGGTGA GATCGAGCCA
GGACGGCTGG CCACCCTGCA CCACCTGCTG GACGAAGCCG CCTGA
|
|---|
| Protein sequence | MSPAMWACSP VRTVAQSRSR RHQPRPDHNH PGDGEPPVSP AAGQTGRVVS HHGRESLVED
REGRLYRCLS LKRVGRPLCG DYVDWHPETD ETGVIDRIHP RHGVIARTAY NGRVQAIAAN
VDRMVVVSAL EPPPDPELIN RYLVLAHHLA VEPLLWLNKT DLDPDQAERL LASVFAGHRA
RGVAVMAGSP HTGEGMETLR EALREGTSVL VGLSGVGKSS LIKALLPDRD LRIGDLSARS
GLGRHTTTET TLYHLPEGGD LIDSPGIRAL RLANIPREAL QPAFPEIARV ASGCRFHNCQ
HRNEPGCAVR AAVERGEIEP GRLATLHHLL DEAA
|
|---|
| |