| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1451 |
|---|
| Symbol | |
|---|
| ID | 4270232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1655667 |
|---|
| End bp | 1656767 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638126207 |
|---|
| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| Protein accession | YP_742290 |
|---|
| Protein GI | 114320607 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.338656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAA CGGACAAGGT CGTGGTGGGC CTCTCCGGCG GGGTGGATTC CGCCGTGGCG
GCGATGCGCC TGCTCGAGGC AGGGCATCAC GTCGAGGGCT TGTTCATGAA GAACTGGGAG
GATGACGACA CCCTCACCCA CTGCGCCGCC GAAGAGGACC TGGCCGAAGC CCAGGCCGTG
GCCGATCACC TGGGTATCCG CCTGCACCGG GCCAACTTCG CCGCCCGCTA CCGGGAGCAG
GTCTTCGAGG TGTGCCTGCG CGAGTACCGG GCCGGGCGCA CGCCCAATCC CGACATCCTC
TGCAACCAGC GGATCAAGTT CCGCGCCTTC CTGGACCACG CCCTGAGCCT GGGGGCATCG
AAGGTGGCTA CCGGCCACTA TGCCGGGGTT GGCGAGCAGG GGGGGCGATT CACCCTGCTC
CGGGGCGAGG ATCCGCACAA GGACCAGAGC TACTTTCTCT ACACCCTGGG CCAGGCGCAG
CTCCGCCACA GCCTGTTCCC GCTCAGTGAG CTGCCCAAGC CCGAGGTGCG CCGGCAGGCC
GCTGCAGCGG GGCTGCCCAA CCACGCCCGC CGGGACAGCA CCGGCATCTG CTTTATCGGC
GAGCGCGACT TTCGCGCGTT TCTGAGCCGC TACATTCAGC GCAGCCCGGG GCCCATGGAG
ACCCCCGAGG GGCAGGTGGT GGGTGAGCAT CAGGGGTTGG CCTTTTACAC CCTCGGCCAA
CGCCGCGGTC TGGGCCTGGG CGGCCTGCCC GATCACGACG AAGGGGCCTG GTACGTCGCC
GACAAAGACA TGGCGCGCAA CGCCTTGATC GTCGTGCAGG GCCACGCCCA CCCGCGCCTG
CTGTCCACCG CGCTGGTGGC GGATGAGCTC TCCTGGGTGG CGGGTGCTCC CCCCACCCTG
CCCCTGCGCT GCACGGTCAA GTCACGCTAT CGTCAACAGG ATCAGCCCTG CGCCCTCGAG
GCAGGCCCGT CGCCAACCAG CGTGGTGGTC CGCTTCGATA CCCCGCAGCG GGCCGTCACC
CCGGGCCAGT CGGTGGTCTT CTACCAAGGC CGGGTCTGCC TGGGCGGCGG CATCATCCAG
ACCCGAACCC CTGTGGAATA A
|
|---|
| Protein sequence | MGKTDKVVVG LSGGVDSAVA AMRLLEAGHH VEGLFMKNWE DDDTLTHCAA EEDLAEAQAV
ADHLGIRLHR ANFAARYREQ VFEVCLREYR AGRTPNPDIL CNQRIKFRAF LDHALSLGAS
KVATGHYAGV GEQGGRFTLL RGEDPHKDQS YFLYTLGQAQ LRHSLFPLSE LPKPEVRRQA
AAAGLPNHAR RDSTGICFIG ERDFRAFLSR YIQRSPGPME TPEGQVVGEH QGLAFYTLGQ
RRGLGLGGLP DHDEGAWYVA DKDMARNALI VVQGHAHPRL LSTALVADEL SWVAGAPPTL
PLRCTVKSRY RQQDQPCALE AGPSPTSVVV RFDTPQRAVT PGQSVVFYQG RVCLGGGIIQ
TRTPVE
|
|---|
| |