Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1430 |
Symbol | |
ID | 4269240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1634203 |
End bp | 1637424 |
Gene Length | 3222 bp |
Protein Length | 1073 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638126186 |
Product | ribonuclease E |
Protein accession | YP_742269 |
Protein GI | 114320586 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.260181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TGCTGATCAA CGCAACTCAG CCAGAGGAGT TGCGTGTTGC CCTCGTGGAC GGGCAACAGC TCTACGACCT GGATATCGAA ACCCCGGCCC GGGAGCAGAA GAAGGCCAAC ATCTACAAGG GCACCATCAC CCGCGTGGAG CCCAGCCTGG AGGCGGCCTT CGTACAGTAC GGCGCGGAGC GCCACGGGTT TCTGCCGTTT AAGGAGATTG CCCCCAGCTA CTACCGCGAG GGTCTCAAGG CCGACGGGGG GCGCCCCAGC ATCCGCGATG CGGTGCGTGA GGGCCAGGAG GTGGTGGTTC AGGTGGACAA GGAGGAGCGC GGCACCAAGG GTGCGGCGTT GACCACCTAC ATCAGCCTGG CCGGGCGCTA CCTGGTGCTC ATGCCCAACA ACCCGCGCGC CGGCGGCGTC TCGCGCCGCA TTGAGGGCTC CGACCGGGCC GAAATCCGCG AGGCGCTGCG ACAACTCGAC GTCCCGGAGG GCATGGGTCT GATCGTCCGC ACCGCCGGCG TGGGCCGGAC GGTGGAGGAA CTGCAGTGGG ACCTCGATTA CCTGCTCAAG CTCTGGAGCG CTATCCAGAA GGCCGCCGAG GCCCGGTCCG CCCCCTTCCT GATCTACCAG GAGAGCGACG TCATCATTCG CGCGCTGCGC GACTACCTGC GCTCGGATAT CGGGGAGATT CTCATCGATG ACCCGCAGGT CTTTGAAAAG GCCGTGGAGT TCGTCGAGCA GGTCATGCCG TATAACCGGC AGAAGCTGAA GTACTACGAC GACCGGGTAC CGCTGTTCAC CCGTTACCAG ATCGAAAGCC AGATCGAATC CGCCTTCCAG CGGGACGTTC GTCTGCCCTC CGGCGGTGCC ATCGTGATCG ACCACACCGA GGCGCTGATC TCCATCGACA TCAACTCGGC CCGGGCCACC AAAGGCTCGG ACATCGAGGA GACGGCCCTG CACACCAACC TCGAAGCCGC CGACGAGATC GCCCGGCAGC TCCGATTGCG GGATCTGGGC GGGCTGATCG TGATCGACTT CATTGACATG GGCCCGAACC GAAACCAGCG GGAGGTGGAA AACCGACTCC GCGAGGCGGT CAAGGCGGAC CGAGCCCGGG TTCAGATCGG GCGAATCTCC CGCTTTGGTT TGCTGGAGAT GTCCCGCCAG CGGCTTCGTT CGTCCCTGGG CGAGTCGCAC CAGGAGGTCT GCGCCCGCTG TGGTGGCCAG GGTACCGTGC GCAGCGTGGA GTCGCTGGCC CTTTCCATCC TGCGCATCGT CGAGGAAGAG GCGATGAAGG AGAAGACCGG GACGGTGCTG GCGCAGCTCC CGGTGGATGT CGCCACCTTC CTTTTGAACG AGAAACGGCC CTCCATCAGT GAGATCGAGG ATCGCCACAG GGTGGCCGTG GTGCTGATCC CCAATCGCAC CATGGAGACA CCCCACTACG ACGTCCAGCG CCTGCGTAGC GACGACGAGT CCACCGAGGA CCCCAGTTAC CGGCTCGCCT CCGAGGAACA TCCAGAGCCC TCCCCCGAGT GGTTGGAGCG GGAGGCCGCG CCGCGCTCGG AGGAACCGGT GGTCCAGCGG GTACAGCCGC CCTCCGCACC GCCGCCGACG GCGCCCGTCG AAGAGAGTCC AAAGGAAGAA GCGCCACCAC CGCAGCGCGA CGCGCCCGAA GGTAGCGGCG CATCGGACGT CGGGATCAGC GGCCTCACCG GCCTGTTCCA GCGGCTCCGT GGCTTCTTTG GGCGGGAAGC GGACAACGAC AGCGCCGGTC AGGAGGGTCC AGTCGGCGAG AAGGCCCCTG CTGCCTCCGG GCGACGCGGC AGCGATCAGA AGGGAGCCAC CAACGGGCGC CGGGGCGGTG GTAGTAACGG CGGCAAGGGT GGCCGGACAC GGCAAAAGGC GCGCCCCGAG GACGGTCGAT CGGCCTCGCA ACCGGAGGCT ACCGGCAAGC CGGAGAGTGA TGCCCGGCGC GATGCGGATG AGACCGCCGA GGGCGCCGGT CGCAGCGGTC GCAGCCGGCG CGGCCGGCGG GGCGGACGGC GCCGCCGGCG TAGCGGGAGC ACAGGCGGTG GCCAGCCGGA GGAATCGGCC GCACGCCAGG ATCAGAAGGG GCAGACCCCG CCGGCGGCAG AGGCCGCGGA CGACGCTCCC CGGGATCGCG CCGCCGGCAA GGCCGAGGCC GCCGCCGAGC GGCCCAGGGA GGGAGACCGC GCGGCGGCCG AGAAACCGGC GGCCAGCGAA AAGGTAAAGG CTGACAAGCC GGCGCTGCCA ACGATCACCG AGGAGGAGAT CCAGGGCAGC GCCACCCCGC AGCTCAAGGA CTGGCCACCG CGGGGCCAGG TCGCCACCGA GGCCGCCAGT CCCGAATCGG CGCCGGCGGA CGACGAGAGC GGCACCGCCG CCGGGTCGCC GAAGGCCACG CAGGCCCAAC GACCGGCGAC GGCCGACACC GAGGCCTCCG ACACCAAGGC AGATGCGCCG GCGTCCTCCG GTGAGACGCC CGCCGACCAA CCGACCGGTG CGCCACCGGC GGCTGGCGGT GACGGGGCCA AGGCGCCGAC CGCTGAGAAG GCCGCTGGCG AGAAGCCGGG GGCGCGGCGC AAGCGCTCGA AGCCCAGTGT CCAACCGGGC ACGCCGCCGG TCCTGCCGCA GGATATCGGC CCGGATGAAC CGTCGGTGCG CTCCGGGCGC CCGCGTATCA GCGCAGCGGC CCCCACCGAG GGCAACGAGG CCGACACCGC CGGCTCGGCT GACGTCGCCC CGCGTGAGCC GACACCGGCT AACACGGGGA CCGATCAGCC ACCGAAACCG GCGCCGGAAC CAGCGCCGGC CAAGGCGCCG GAGCCGGCCC CGGGGTCCGA TAGTGAGCCA GCGGCCGCCG ACCAGGACGC CGCGCCTGCC GAGGAGGTGC CCAACGCCGC CGACGACGGT GCTGCCGGGC CACAGGCAAC CCCTTGGCTG GAGCACGAGC CTGAGAGCAG TCGGGAGGCC ATTGGCGCCC ATAGCGCGGG TACGCCGGAC GCTCCTGATG CGCAGAAGGC CCCGGCCGAC ACCGCGGATG CCGCGGACAC CGCGGGCGAC GAAGGCGGGG ATCAGACGCA GGAGACCGAT GAGGCCTCCC GAAAGGGCGG TTCCCGGAGA AAGGGGCCGG CCGGGGAGAG TGAGGCGCGG CCCGAATCCC CGGACCAGGG CAGGTCACGA GAGGATGACT GA
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Protein sequence | MKRMLINATQ PEELRVALVD GQQLYDLDIE TPAREQKKAN IYKGTITRVE PSLEAAFVQY GAERHGFLPF KEIAPSYYRE GLKADGGRPS IRDAVREGQE VVVQVDKEER GTKGAALTTY ISLAGRYLVL MPNNPRAGGV SRRIEGSDRA EIREALRQLD VPEGMGLIVR TAGVGRTVEE LQWDLDYLLK LWSAIQKAAE ARSAPFLIYQ ESDVIIRALR DYLRSDIGEI LIDDPQVFEK AVEFVEQVMP YNRQKLKYYD DRVPLFTRYQ IESQIESAFQ RDVRLPSGGA IVIDHTEALI SIDINSARAT KGSDIEETAL HTNLEAADEI ARQLRLRDLG GLIVIDFIDM GPNRNQREVE NRLREAVKAD RARVQIGRIS RFGLLEMSRQ RLRSSLGESH QEVCARCGGQ GTVRSVESLA LSILRIVEEE AMKEKTGTVL AQLPVDVATF LLNEKRPSIS EIEDRHRVAV VLIPNRTMET PHYDVQRLRS DDESTEDPSY RLASEEHPEP SPEWLEREAA PRSEEPVVQR VQPPSAPPPT APVEESPKEE APPPQRDAPE GSGASDVGIS GLTGLFQRLR GFFGREADND SAGQEGPVGE KAPAASGRRG SDQKGATNGR RGGGSNGGKG GRTRQKARPE DGRSASQPEA TGKPESDARR DADETAEGAG RSGRSRRGRR GGRRRRRSGS TGGGQPEESA ARQDQKGQTP PAAEAADDAP RDRAAGKAEA AAERPREGDR AAAEKPAASE KVKADKPALP TITEEEIQGS ATPQLKDWPP RGQVATEAAS PESAPADDES GTAAGSPKAT QAQRPATADT EASDTKADAP ASSGETPADQ PTGAPPAAGG DGAKAPTAEK AAGEKPGARR KRSKPSVQPG TPPVLPQDIG PDEPSVRSGR PRISAAAPTE GNEADTAGSA DVAPREPTPA NTGTDQPPKP APEPAPAKAP EPAPGSDSEP AAADQDAAPA EEVPNAADDG AAGPQATPWL EHEPESSREA IGAHSAGTPD APDAQKAPAD TADAADTAGD EGGDQTQETD EASRKGGSRR KGPAGESEAR PESPDQGRSR EDD
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