| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1411 |
|---|
| Symbol | |
|---|
| ID | 4270633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1617402 |
|---|
| End bp | 1618382 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638126167 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_742250 |
|---|
| Protein GI | 114320567 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.271833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.902662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGAA CCGTCGGCCC CTTTGTCCTC GCCACCGCCT TTGGCGCCTT CCTGACCGCC
GGCCTCGCAC CGGCCAGCCA GGACATTGAA GGCGCCGGGG ACCATCCGGA CGTGCCCCGC
GTCGCCGGCT CTTACATCGT CTATCACGAC GTCACCGATT TCGACCGCCT GACCGTGCCA
ACCGGCCCCT ACACCGGCGA GGGTTTCGAG TCCACGGCGG TCATGGAAGG GGAGGTGCTC
AGTCAAAGCT ACGTCTTCGA CGACCCCAGC GTCGCCACGC TCCGCGTAAA ACGCAGTTAT
ATCCATGCGT TGGAGGATAG CGGCTTCGAC ATCCTGTACA CCGGCAGCGA GGCGGAGCTC
TCCGGCGGCG ACGGCCGCAC GTTTTTCATC CAGTCCGGTC TCTTTGAGCG CGGTGCCCGC
GACTGCTGCC GCGTGGCCAA CCGTGACCGT CAGGTCCGCT ATATCGCCGC GCGCTCAGGG
AGCGGTGAGG TGCTGGCGGC CATCGCCATC TATAACGCCC GCGGCGTGGA TGGCCCGGCG
GTCTCCAAGG CCATCGTGAC CGCCGAGGAG ATGGCGACGG CGATGGAGCA CAAGCCGCTG
ACGGCCGGCG AGATGGAGAC CGGCCTAGTC GAGGACGGCC GGGTGGCCAT CCAGAATATC
CTCTTCGCCG TCAACAGCGC CGAAATCCTG CCGGACTCCG CGGACGCGCT GGAGGCCATC
GCCGAGCTGA TGTCGGAGCA GCCGGACCTG ACGTTGCTGG TGGTGGGCCA TACCGACAGC
ACCGGTGACT ACGACTATAA CCTGACCCTG TCCATGGAAC GCGCCGAGGC CGTGGTGCGC
TGGCTGCAGC GGGAACACGG CATCGATGGC GACCGCCTGC AGGCGGCGGG CGCGGGCATG
ATGGCACCGG TGACCAGCAA CCGTACCGAA GCCGGCCGTG CGGAGAACCG CCGGGTGGAG
CTGGTGGAGC GCAATCCCTG A
|
|---|
| Protein sequence | MHRTVGPFVL ATAFGAFLTA GLAPASQDIE GAGDHPDVPR VAGSYIVYHD VTDFDRLTVP
TGPYTGEGFE STAVMEGEVL SQSYVFDDPS VATLRVKRSY IHALEDSGFD ILYTGSEAEL
SGGDGRTFFI QSGLFERGAR DCCRVANRDR QVRYIAARSG SGEVLAAIAI YNARGVDGPA
VSKAIVTAEE MATAMEHKPL TAGEMETGLV EDGRVAIQNI LFAVNSAEIL PDSADALEAI
AELMSEQPDL TLLVVGHTDS TGDYDYNLTL SMERAEAVVR WLQREHGIDG DRLQAAGAGM
MAPVTSNRTE AGRAENRRVE LVERNP
|
|---|
| |