| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1407 |
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| Symbol | |
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| ID | 4270629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1610550 |
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| End bp | 1612016 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126163 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_742246 |
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| Protein GI | 114320563 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.380774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGG CGATAACCGC CCTGGCCGCA GTACTGATAC TGGCCGGCTG CGCCGTCGGC
CCAGACTACC AGGCCCCGGA AATGGACCTG CCGGAGGCCT GGCCCGAAAG CAGCCTGTTG
GCCGATGGGG AGCGGGCGGC GTGGGTGGAC TGGTGGAAGC GGTTCGACGA CCCCACCCTC
AACCAACTGG TCGAGCGGGC GGTGGCCAAC AACCTGGACA TCCGCCTGCA GGCGGCCCGT
CTCGAGGAGG CCCGCGCCCG GTTGGGCATG GCCAGCGCGG AGCAACTGCC CACGGTCGAC
CTGCAGGCGG AGGCGGCGCG GGAGCGCGGC CCCGCCACCC TGCAGCCGGC GTTTCCGGGT
GTGGAGCCGC GAGCCCGTAC CGACAACCTG TTCTCGGTAA GCGGCGTGCT GGGTTATGAG
ATCGATCTGT TTGGCCGCCT GGCCCGGGAG CGTGAGGCGG CCGAGGCCTT CCTGCTGGAG
AATGTCTTCA GCCAGGATGC CGTGCGGCTG AACCTCATCG CCGATGTGGT CACCACCTAC
TTCGACCTGC GGGCGGCCCA GCAACAGCTG GCCATCACGG AGAACACCCT GGTCTCCCGG
GAGGAGACCT ACGCCCTGGA GCGGGTGCGT TACGAGGCGG GTGAAACCGA CGAGCTGACG
CTGCGCCAGG CGGAGGCCGA ACTGCAGAGC ACTCGGGCGG AGATCCCCCT GCGCCAGGAG
CAGGTGAGCA CCTTGGAGGG GGTGCTGGGC GTGCTGGTGG GTATGAGCCC CGCGGAGCTG
ATGACCCTCG ATGAGATGGA CCTGGGCGAG TACACGCCAC TGGAGGCCAT TCACCTGCCG
GAGGACCTGC CCGCAACCCT GCCCTCAGAA CTGCTGGAGC GGCGGCCGGA TGTGCGGGCG
GCCGAGGCCG AACTGATGGC CGCCACCGCA GCCATCGGCG TTGCGCAGGC GGAACGCCTG
CCCCGGCTAA ACCTCACCGC CCTGCTCGGC ACGGCGGCCA CCGACACCAG CGACTTATTC
ACCGGGGCCG CGGAGACCTG GGGCCTGGGG AGCTCGGTGG CGGGGCCACT GTTCGATTTC
GGTCGCGGGC GCGCCGGGGT GGAGGCCGCC GAGGCCATGG CGGCGCAATC ACGTGCCCGG
TATCAGGCCA CCGTGATCAG CGCCTTCAAC GAGGTGCGCG ACGCCCTGAG CCTGTACCGC
ACCAGCAGCC AGCGGGCTCA GGCTATCCGA GCGCAGGTGG CGGCGGTGGA GCGCACCTCG
CAGCTGGCCG AACTGCGCTA TCAGGAGGGC TTCATCGGCT TTATCGAGGT GCTCGACGCC
CAACGCAGCC TGCTGGCCGC GGAGCTGGCC CTGGCCGAGG CGGTGCGCGA CCAGCTGAAC
GCTACCGCCA CCCTGTTCAA GGCCCTGGGG GGCGGCTGGG CGCAGCCGGA CCCGCCGGCG
GACGACGCAC GCGACGAGCC CGGCTGA
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| Protein sequence | MRKAITALAA VLILAGCAVG PDYQAPEMDL PEAWPESSLL ADGERAAWVD WWKRFDDPTL
NQLVERAVAN NLDIRLQAAR LEEARARLGM ASAEQLPTVD LQAEAARERG PATLQPAFPG
VEPRARTDNL FSVSGVLGYE IDLFGRLARE REAAEAFLLE NVFSQDAVRL NLIADVVTTY
FDLRAAQQQL AITENTLVSR EETYALERVR YEAGETDELT LRQAEAELQS TRAEIPLRQE
QVSTLEGVLG VLVGMSPAEL MTLDEMDLGE YTPLEAIHLP EDLPATLPSE LLERRPDVRA
AEAELMAATA AIGVAQAERL PRLNLTALLG TAATDTSDLF TGAAETWGLG SSVAGPLFDF
GRGRAGVEAA EAMAAQSRAR YQATVISAFN EVRDALSLYR TSSQRAQAIR AQVAAVERTS
QLAELRYQEG FIGFIEVLDA QRSLLAAELA LAEAVRDQLN ATATLFKALG GGWAQPDPPA
DDARDEPG
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