| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1394 |
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| Symbol | |
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| ID | 4269586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1597818 |
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| End bp | 1599011 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638126150 |
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| Product | TraB family protein |
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| Protein accession | YP_742233 |
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| Protein GI | 114320550 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.743026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.420274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC AAGGCCCCAG GCGCACCGTA ACCGTCGGTG GCACCACATT CACCCTGCTC
GGCACCGCCC ATGTCTCCCG CGCCAGCGCG GATGAGGTCC GCACCTTGAT CCGCAGCGGC
GATTTTGACG CCGTGGCGGT GGAGTTGTGC GACAGTCGCT ACCTCAGCCT GACCAATCCG
CAGGCCTTGG AGCAAATGGA CCTGTTCAAG GTGCTGCGCG ACGGCCGCGG CGGGATGGTG
GCAGCGAGCC TTGCCCTGGG GGCCTACCAG CAGCGGCTGG CCGAGCAGTT CGGCATCGAG
CCCGGTGCTG AGATGAAGAC CGCCGCCAAG GAGGCCAAGG CCGCCGAAAA ACCCCTGATG
CTGGTGGACC GGGACATCGG CGTGACCATG AAGCGGCTCT ACCGCAACAT CCCCTGGTGG
CAACGTTTCA CCCTGATCTC CGGGCTGTTT GCCGGCCTGT TCTCCCGTGA GAAGGTGACC
GAGGAGGATA TCGAACGGCT CAAACAGGGC GATATCCTCG AGTCCACCTT CGCGGAGTTC
GCTCAGAGTT CCACCCGCCT CTACCAACCG CTGATCGCCG AGCGCGACCG TTACATGGCC
AGCCGCCTGC TGCAGGAGAC CGCTGGCCAC GACTATGGGA ATGTCCTGGT GGTCATTGGC
GCGGGCCACC TCAAGGGGTT GGCCGAGGCC TTGGCAGAGC CGGTGCCCGA TCCAGCGGCG
GAGCAGGCGG AACTCTCGAA GATGCCCCCG CCCAGCCCCT GGCCCAAGCG GATCGCTTGG
CTGGTGATCC TGCTGGTGCT CTCCGGCTTC GCCATCGGCT TCTCCCGCAG CCCGGAGCTG
GGGCTGCGGC TGGTGCTGGA CTGGGTGTTG ATCAATGGGG GATTGTCAGC GGCCGGTGCC
CTGGTCGCCG GCGGCCATCC GGTGACCGTG GTGGGGGCCT TCTTCGCCGC ACCGCTGACC
TCACTGAACC CGACGGTGGG GGCGGGCTTC GTCGCCGCGG CCATCGAGAT CGCCATGCGG
CGGCCCCGGG TGGGCGATTT CCGCAGCCTG CGTCAGTCGG TGACCCGCTG GCGCGGCTGG
TGGACCAACC GGGTCTCCCG CACCCTGCTG GTCTTCCTGT TCGCCTCGCT GGGTTCCGCG
GTGGGGACCT ACCTGGCCGG CTTCCGTATC TTTGAGCGCC TGATCGGCGC CTGA
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| Protein sequence | MTTQGPRRTV TVGGTTFTLL GTAHVSRASA DEVRTLIRSG DFDAVAVELC DSRYLSLTNP
QALEQMDLFK VLRDGRGGMV AASLALGAYQ QRLAEQFGIE PGAEMKTAAK EAKAAEKPLM
LVDRDIGVTM KRLYRNIPWW QRFTLISGLF AGLFSREKVT EEDIERLKQG DILESTFAEF
AQSSTRLYQP LIAERDRYMA SRLLQETAGH DYGNVLVVIG AGHLKGLAEA LAEPVPDPAA
EQAELSKMPP PSPWPKRIAW LVILLVLSGF AIGFSRSPEL GLRLVLDWVL INGGLSAAGA
LVAGGHPVTV VGAFFAAPLT SLNPTVGAGF VAAAIEIAMR RPRVGDFRSL RQSVTRWRGW
WTNRVSRTLL VFLFASLGSA VGTYLAGFRI FERLIGA
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