| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1390 |
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| Symbol | |
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| ID | 4269582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1591926 |
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| End bp | 1595045 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638126146 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_742229 |
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| Protein GI | 114320546 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.245764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.515313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAC GGATCATTCA GTGGTCGCTG GACAACCGCC TGCTGGTGCT GCTGCTCACC
GGCGTCTTCG TGGCCTGGGG GGTGTTCTCC GCCCGACAAA CGCCGTTGGA CGCCATTCCC
GATTTGTCGG ATGTGCAGGT GATCGTACAC ACCGAGTATG CCGGGCAGGC GCCCCAGGTG
GTGGAGGACC AAGTCACCTA TCCGCTCTCC ACCGCCATGC TGGCCGTGCC GGGGGCGCGG
GACGTGCGCG GGTTCTCCAT GTTCGGCGAC TCCTACGTCT ATGTCCTGTT CGAGGATGGC
ACCGATCCCT ACTGGGCGCG CTCACGGGTG CTGGAGTACC TCAGCCAGGT GGCGCCCGAC
CTGCCCGACG AGGCCCGTCC GGCGCTGGGG CCGGACGCCA CGGGGGTGGG TTGGGTGTAC
CAATATGCCC TGGTCGACCG CACTGGGACG CATGATCTGG CCCAATTGCG CTCCCTTCAG
GACTGGTTTC TGAAGTTCGA GCTCCAGTCT GTCACCGGTG TCTCCGAGGT GGCCACCCTG
GGCGGCATGG TCAACCAGTA CCAGGTGGTG CTGGACCCTA ACCGGGCGCG CGCCTATGGC
CTGACTCTGG GCCAAATCCG ACAGGCCATT CAGGACGGCA ACCGCGAGGC GGGCGGTTCA
GTGGTGGAGA TGGCCGAGGC CGAGTACATG GTGCGCTCCC GCGGCTACCT CACCGGCTTG
AACGACCTGG GACACATCCC CGTGGGGGCC AGCGAAGAGG GCACCCCGGT GCTACTGGAG
GACGTGGCGG AGATCCGCAA CGGCCCCGAG GCCCGGCGCG GGCTGGCCGA GCTGGACGGC
GAGGGCGAGG TGGTTGGCGC CCTGGTGGTC ATGCGCCACG GTGAGAATGC CCTGGCCACA
ATCGAGCGGG TCAAGGAGCG GGTGGACGAA CTCAGGGGCA GCCTGCCCGA GGGTGTGGAG
ATCGTGGAAA CCTACGACCG CTCCACGCTC ATCGAGGCGT CGGTGCAGAA CCTCTCCGTG
AAGCTGGTCC AGGAGTTCCT GATCATCGCG GCGGTCTCCC TGGTGTTCCT GCTGCACCTG
CGCTCGGCGC TGGTGGCCAT TGTCAGTCTG CCCATCGGCA TCCTGGCTGC ACTGCTGATC
ATGCAGCAGC AGGGGATCAA CGCCAACATC ATGTCCCTGG GCGGTATCGC CGTCACCATC
GGGGCCATGG TGGACGCGGC CATCGTCATG GTGGAGAACC TGCACAAACG GCTGGAGCGG
GCACCGCCCA ATGCCGACCG CTGGGAGACG GTAGCCCTGG CCGCCAAGGA GACCGGCCGG
CCGCTCTTCT TTGCACTGCT GATCATCACC GTGAGCTTCC TGCCGCTCTT TGCGCTGGAG
GGGCAGGAGG GGCGGATGTT CAAGCCTCTG GCCTTTACTG GCACCTACGC CATGGCGGCT
GCCGCCGGTC TGGGCATCAC CTTGGTGCCG GTGCTGATGG GCTACCTGGT GCGCGGACGG
ATCCGACCGG AGGCCCGCCA TCCGATCAGC CGCCTGCTGA TTGCCGGCTA CCGGCCGGTG
TTACGGGGGC TGCTGCGCTA TCCCTGGGCG ACCGTGGGGG GCGCGGTGCT GGTGGCCGCC
ACCATGGTCA TTCCGGCCTC CAAGCTGGGC ACTGAGTTCA TGCCCGAACT GGACGAGGGC
GATCTGATGT ACATGCCCTC ACTGGAGCCC GGGGCCTCCA TCGACAAGGT GCGGGCGTTC
CTGCAGCAGA CCGACCGGCT GATCGCCTCG GTGCCGGAGG TGGAGCAAGT GTTCGGCAAG
GCCGGCCGTG CCGATACCGC CACCGATCCG GCGCCCCTGG GGATGCTGGA GACCGTCATT
CGCTTCAAGC CGCAGGAGGA GTGGCGCGAG GGGATGACCA AGCAGGACAT TATCCGCGAA
CTGGACCAGG CGGTGCAGTT CCCGGGCGTG GCCAACGTCT GGGTGCCGCC CATCAAGACC
CGCATCGACA TGCTGGCCAC CGGCATCCGC TCCCCTGTGG GGGTCAAGAT TGCCGGGCCC
GATTTGGGCG AGATCGAACG CATCGGCCAG CAGGTGGAAG CGGCACTGGA GCACGTCCCG
GGTACGGCAT CGGCCTACGC CGATCGGACC GCCACCGGTC GTTACGTGGA GGTGGACATC
CACCGCGCGC GCGCGGCGCG CCACGGGGTC AGCGTGACGG AACTCCAAAC GGTCATCCAG
GCGGCAGTGG GCGGCATGAA GGTCACTGAC ACCGTCGAAG GGCTGGAACG CTATCCGGTG
AACCTGCGCT ATCCCCAGGA CTGGCGCGAT TCCCTGGAGC GACTGCGCGA ACTGCCGGTG
GTCACTCCCA ACGGCGCCCA TCTTCCGCTG GAATCGCTGG CGTCGGTGGA GATAGTCGAC
GGGCCGGCCA TGATCCGCAC GGAAAACGCG CGCCTCAACG GCTGGGTGGT GGTGGACATC
CGCGGCCGGG ATCTCGGCTC CTATGTGGCG GATGCCCGCC AGGCGGTGGC CGAGCAGGTG
GACCTGCCGC CGGGTTACTC CATCCACTGG TCGGGCCAGT ATGAGCATAT GGAGCGGGCA
AAGGAGCGGC TTGCCTACGT GGTGCCGGTC ACCGTGGTGC TGATCTTCAT GCTGCTTTAC
CTCTGTTTCC GTAGCGGTCC CGAGGCCCTG ATGCTCATGG GGGCGCTGCC CTTCGCCGCC
GTGGGTGGGG TGTGGCTGCT CTACGGGTTG GGCTATGAGG TGTCCGTGGC GGTGGCGGCA
GGCTTCATCC TGCTCATCGG GCTGGCCACG GAGTTTGCGG TGGTGATGCT GATGTACGTG
CGCAACGCTG TGCACCAACA CCGGCCACGG GACCGCCGCG AGCTCAAGGA GGCGATTATC
GAGGGCGCGG TCATGCGCGT CCGGCCCAAG GCGATGACCT CGTTGACCGT GGTGCTGGGA
CTCTCCCCGT TGCTGATGGA CAGCGGCCCC GGCTCCGAGG CGATGCAACG CATCGCCGCT
CCCATGATCG GCGGGATGAT CACCGCCCCG CTGGTCTCAC TGCTGCTGAT CCCGGTGCTC
TACTGGCTCT GGCAGCGTCA CCGGCTTCCT GAGACCCATC AGGAGGGGGC GGGCGCTTGA
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| Protein sequence | MIERIIQWSL DNRLLVLLLT GVFVAWGVFS ARQTPLDAIP DLSDVQVIVH TEYAGQAPQV
VEDQVTYPLS TAMLAVPGAR DVRGFSMFGD SYVYVLFEDG TDPYWARSRV LEYLSQVAPD
LPDEARPALG PDATGVGWVY QYALVDRTGT HDLAQLRSLQ DWFLKFELQS VTGVSEVATL
GGMVNQYQVV LDPNRARAYG LTLGQIRQAI QDGNREAGGS VVEMAEAEYM VRSRGYLTGL
NDLGHIPVGA SEEGTPVLLE DVAEIRNGPE ARRGLAELDG EGEVVGALVV MRHGENALAT
IERVKERVDE LRGSLPEGVE IVETYDRSTL IEASVQNLSV KLVQEFLIIA AVSLVFLLHL
RSALVAIVSL PIGILAALLI MQQQGINANI MSLGGIAVTI GAMVDAAIVM VENLHKRLER
APPNADRWET VALAAKETGR PLFFALLIIT VSFLPLFALE GQEGRMFKPL AFTGTYAMAA
AAGLGITLVP VLMGYLVRGR IRPEARHPIS RLLIAGYRPV LRGLLRYPWA TVGGAVLVAA
TMVIPASKLG TEFMPELDEG DLMYMPSLEP GASIDKVRAF LQQTDRLIAS VPEVEQVFGK
AGRADTATDP APLGMLETVI RFKPQEEWRE GMTKQDIIRE LDQAVQFPGV ANVWVPPIKT
RIDMLATGIR SPVGVKIAGP DLGEIERIGQ QVEAALEHVP GTASAYADRT ATGRYVEVDI
HRARAARHGV SVTELQTVIQ AAVGGMKVTD TVEGLERYPV NLRYPQDWRD SLERLRELPV
VTPNGAHLPL ESLASVEIVD GPAMIRTENA RLNGWVVVDI RGRDLGSYVA DARQAVAEQV
DLPPGYSIHW SGQYEHMERA KERLAYVVPV TVVLIFMLLY LCFRSGPEAL MLMGALPFAA
VGGVWLLYGL GYEVSVAVAA GFILLIGLAT EFAVVMLMYV RNAVHQHRPR DRRELKEAII
EGAVMRVRPK AMTSLTVVLG LSPLLMDSGP GSEAMQRIAA PMIGGMITAP LVSLLLIPVL
YWLWQRHRLP ETHQEGAGA
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