Gene Mlg_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1388 
Symbol 
ID4269580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1589156 
End bp1590409 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content71% 
IMG OID638126144 
Productouter membrane efflux protein 
Protein accessionYP_742227 
Protein GI114320544 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.615787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCT TGAGTCCGGG CAGGCCAAAA GGCCTGCTGT TTGGTGTGCT GCTGGCCGCC 
GTGCCCGTCC TGGCACCGGC CCAGCCCGCC CTGACCCTGG AAGCGGCCGA GAACATGGCC
CTTCAGGAGG AACCGACCAT CGCCCGTTAC CGGGAGCGGG CCGCTGCCCG GGAGGAGGCC
GCTGTGGCGG CGGGCGCCCT GCCGGACCCC CTGCTGATCA CCGAGCTGAT GGACGTGCCC
GCGGACCGGC CGCGGCTGGA CGGGGACGAG ATGACCCAGT TCAAGGTGGG GCTGCGGCAG
GCCTTCCCGC GGGGCCAGAC CCGCACTCTC CGCCAGGAGC GAGGGGGTCT GCGGGCGAGC
CAGGCCCATG CCCGGGGCGA CGACGCCGAA CGGGCGGCGC TCAACGCGGT GCGTCAAGCC
TACTTGCGGC TCTACAACCA GCGCCGGGCC GTGGCATTGC TGGAGGGCAA CCGCAGTCAC
TTCGAAGAAT TGCTGGAAAT CACGGAGCGG GCGCTGGCCG CGGGTCGTGT CTCCCGCCAG
GATGTGATCC GCGCCGAGCT GGAGCTGGAG CGGCTGGAGG ACCGCCTGAG CGCCGCCCGG
GCGGCAGAGG CCGACGCCGA GTCGGCCTTA GCCCGCTGGA TTGGTCCCCA GGCCGCGCGG
CGGCCGTTGC CGGATGCGCT GCCGGAGCTA GCGCTACCGG ATGACAACGG CATTGACCAT
CACCCCCTGT TGCAGGCCCA GGACTTGGCC GTGGCCGACC AGCGCCGGGG AGTGGATCTG
GCCCGGCAGG GCTACCGGCC CGAGTGGTCG GTGGAGCTGA CCTACGGGAT GGCCACCGGC
AATGACATGG ATGCCCCGGA TCGCCTGTCC GCCATGGTGG TGCTGGACCT GCCGCTGTTC
ACCCGCAATC GCCAGGACCG GGATGTGGCC GCCAGCCGGC GCGAGGTGTA TGCCGCCAAG
CACGACCGCG AGGTGCAGCA CCGCACCCTT ACTCAAGCCC TGGCCAGCCA GGCGGCCCGC
TGGCAGCGCC TGCGGGAGCG AGAGCGGCGC TTCGAGGAGC GGCTGCTGAT CCACGCCGCC
GACAATGTGG AGGCAGCGGA ACAGGCCTAC CGGGCGGGCA CCCTGGCGTT CACCGCACTG
ATGCAGGCCC GCATCACCTA TCTGGAAACC CACCTGGATG CCGTTCAAGT GGCCACCGAC
CGCCGGATGG CCCAGGCGGA ACTCCTCTAT CTCTCAGGAG CGACCCGGCG ATGA
 
Protein sequence
MHFLSPGRPK GLLFGVLLAA VPVLAPAQPA LTLEAAENMA LQEEPTIARY RERAAAREEA 
AVAAGALPDP LLITELMDVP ADRPRLDGDE MTQFKVGLRQ AFPRGQTRTL RQERGGLRAS
QAHARGDDAE RAALNAVRQA YLRLYNQRRA VALLEGNRSH FEELLEITER ALAAGRVSRQ
DVIRAELELE RLEDRLSAAR AAEADAESAL ARWIGPQAAR RPLPDALPEL ALPDDNGIDH
HPLLQAQDLA VADQRRGVDL ARQGYRPEWS VELTYGMATG NDMDAPDRLS AMVVLDLPLF
TRNRQDRDVA ASRREVYAAK HDREVQHRTL TQALASQAAR WQRLRERERR FEERLLIHAA
DNVEAAEQAY RAGTLAFTAL MQARITYLET HLDAVQVATD RRMAQAELLY LSGATRR