| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1339 |
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| Symbol | |
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| ID | 4270012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1538574 |
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| End bp | 1539149 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638126092 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_742178 |
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| Protein GI | 114320495 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.148968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTTCGG GCGTCGGCGA CCAGGAGCTG GTGGAGCGCG CTCAGGCCGG AGACAAGCGG
GCCTTCGACG CGCTGGTGAT CAAGTACCAG CAAAAGGTGG TGAAGTTGGT CTCGCGCTAT
GTGCGCGAGC CCAGTGACGC GCTGGATATT GCCCAGGAGG CGTTCATCAA GGCCTATCGG
GCACTGCCGC GTTTCCGGGG CGACAGCAGC TTCTACACCT GGCTGTACCG GATCGCCATC
AACACCGCCA AGAACCATCT GGTCGCGCAG GGTCGCCGTC CGCCCGACTC GGACGTCGAT
GCCGAAGACG CAGAACGCTA CGACATCGAC TCGGGGCTGC GCGACCATGA CACCCCTGAG
GGCTACGCCC GGCGGGACGA GATCGAACGC ACGGTGGTGG ATGCCATCGA GAGTCTTCCA
GAGGATCTGC GCACCGCGAT CACTTTGCGC GAGCTGGAAG GCCTGACGTA CGAGGAGATT
GCCCAGGCAA TGGACTGCCC AGTGGGTACG GTGCGTTCCC GTATCTTCCG GGCCCGTGAG
GCCATCGATA AACGGCTCAG GCCATTGGTT GACTGA
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| Protein sequence | MSSGVGDQEL VERAQAGDKR AFDALVIKYQ QKVVKLVSRY VREPSDALDI AQEAFIKAYR
ALPRFRGDSS FYTWLYRIAI NTAKNHLVAQ GRRPPDSDVD AEDAERYDID SGLRDHDTPE
GYARRDEIER TVVDAIESLP EDLRTAITLR ELEGLTYEEI AQAMDCPVGT VRSRIFRARE
AIDKRLRPLV D
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