| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1335 |
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| Symbol | sdhB |
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| ID | 4270008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1535176 |
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| End bp | 1535952 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638126088 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_742174 |
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| Protein GI | 114320491 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.383265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.998331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAT TCAAGCTTCC CGCCAACTCC GTGGTGGGCG AGGGCAAGAC CTGGAAGGCC
GAGTCCGGCG GCAACGTCCG CCAGTTCAAG ATCTACCGGT GGGATCCGGA CGCCGGTCAG
AACCCGCGTC TGGACACCTA CGAGGTGGAC CTGGATAACT GTGGGCCGAT GGTGCTGGAC
GCCCTGATCA AGATCAAGAA CGAAGTGGAC CCAACGCTGA CCTTCCGGCG CTCCTGCCGT
GAGGGGATCT GCGGCTCCTG TGCCATGAAC ATCGACGGCA CCAACACCCT GGCCTGCACC
AAGGCCATTG ACGAGGTGCG GGGGGATGTC AAGATCTACC CGCTGCCACA CATGTCGGTG
GTCAAGGACC TGGTGCCGGA CATGACCCAC TTCTACGCCC AGTACGCCTC CATCAAGCCC
TGGATGCGCA CCCAGACCCC GGCCCCGCCG GATCAGGAGC GCCTTCAGTC CAAGGAGGAC
CGGGCCAAGC TGGACGGGCT CTATGAGTGC ATCCTCTGCG CCTGCTGCTC CACCAGCTGC
CCGAGCTACT GGTGGAACAG CGATCGGTAT CTGGGCCCGG CCATCCTGCT GCAGGCCTAC
CGCTGGATCG TCGACAGCCG CGACGAGGCC ACCGGCGAAC GGCTGGACGA GCTGGAGGAC
CCCTTCAAGC TCTATCGCTG CCACACCATC ATGAACTGCG CGAAGACCTG TCCCAAGGGG
CTTAACCCGG GTAAGGCCAT CGCGGAGATC AAGAAGATGC TGGTGATGCG GCGGTAA
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| Protein sequence | MAEFKLPANS VVGEGKTWKA ESGGNVRQFK IYRWDPDAGQ NPRLDTYEVD LDNCGPMVLD
ALIKIKNEVD PTLTFRRSCR EGICGSCAMN IDGTNTLACT KAIDEVRGDV KIYPLPHMSV
VKDLVPDMTH FYAQYASIKP WMRTQTPAPP DQERLQSKED RAKLDGLYEC ILCACCSTSC
PSYWWNSDRY LGPAILLQAY RWIVDSRDEA TGERLDELED PFKLYRCHTI MNCAKTCPKG
LNPGKAIAEI KKMLVMRR
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