| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1309 |
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| Symbol | |
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| ID | 4268648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1509484 |
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| End bp | 1510467 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638126062 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_742148 |
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| Protein GI | 114320465 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGC TATTAGGTCA TTCACCGGAA CTGCAATCGG TGCTGCGAGC GGCTCGATTG
GTCGCCAGCA CCGAGGTCAC CACCCTGATC CTGGGTGAAA GCGGCACCGG CAAGGAGTTG
CTGGCCCGCA CGGTCCACGC GGAGAGCCCG CGGGCCAACG GCCCTTTCGT GGCCGTCAAC
TGTGCGGCGC TGCCGGAAGG CCTGGCCGAG TCCGAGTTGT TCGGTCACCG GCGCGGCGCC
TTTACCGGCG CCGTCGATCC CCACGACGGC CGGATCGCCG CCGCAGCCAA TGGTACCCTG
TTTCTGGACG AGGTCGGCGA ACTGCCTGCC GCCGTGCAGG CCAAACTGTT GCGCTTTTTG
GAGTCCGGGG AATGTCAACC GCTGGGCGCC ACTCGCCCGC AATCGGTCAA TACCCGCGTC
GTGGCCGCCA CCCACCGCGA TCTGTACCAG GACGTGGAGG CAGGCCGCTT CCGCGCCGAC
CTCTACTACC GGCTACAGGT CATCCCCTTG GAGCTGCCGG CGTTGCGTGA GCGCCCGGCG
GATATCCCGG TCCTGCTTGA CCACTTCCTG CAGGCCCTGG CCAGACACCA CGACCTGCCC
GCTCCGCGGC TCCAGCCCGA TGCCCTTCGC TGCCTGCAGC GCTACCCCTG GCCGGGCAAT
GTCCGGGAGT TGCGCAACAC CTGCGAGCGC CTGGTGGTGC TGCACGCCGG GCGCACCCTC
ACGGCCGGGG CCTTACCCCC GGAGATCCAG CAGGCCCCCG CGGCGGCACC GCGGGCCAAT
GGCTTCCGGC TGCCGGCGGG GGGCATCCAA ATGGATGAGC TCGAGGCGGA CCTGATCCGC
CAGGCGTTGG AACGGACCGG CGGCAACCGC AGTCAGGCCG CCCGCCTGCT CGGTCTGACC
CGCGACACAC TGTTGTACCG GATGAAGAAA TACGACCTTA CCGAGGCCCC CGTCGCGGCG
TCCGCATCGG CCGTACCCGC ATGA
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| Protein sequence | MGKLLGHSPE LQSVLRAARL VASTEVTTLI LGESGTGKEL LARTVHAESP RANGPFVAVN
CAALPEGLAE SELFGHRRGA FTGAVDPHDG RIAAAANGTL FLDEVGELPA AVQAKLLRFL
ESGECQPLGA TRPQSVNTRV VAATHRDLYQ DVEAGRFRAD LYYRLQVIPL ELPALRERPA
DIPVLLDHFL QALARHHDLP APRLQPDALR CLQRYPWPGN VRELRNTCER LVVLHAGRTL
TAGALPPEIQ QAPAAAPRAN GFRLPAGGIQ MDELEADLIR QALERTGGNR SQAARLLGLT
RDTLLYRMKK YDLTEAPVAA SASAVPA
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