| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1301 |
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| Symbol | |
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| ID | 4268638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1500873 |
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| End bp | 1502558 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126052 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_742140 |
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| Protein GI | 114320457 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGG GAAACACCAC CGGAAACCGA GGATACCGAA GAGACCGGCC TTTGGCGGCG
TGGCTCATCG CCCTGTTCCT GGCTCTGCCC GGCCTGGCCG GTGCCGAGCT ACAGCTGAAA
CGGCTCGACC ACCACGACCC CCACCCCCCG CCGGTCCATC TGCTGCCTGC CGGTCAGGTG
TTGGACGCCA GCCGGCCCAT TAACCTGGGG CTTTCATCGC GCCCGGTCTG GCTGCACCTG
GAGATCTCGG CACCGCCCCC CCGGGTCCTG CACCTGGACA ATCCACTGCT GCACGATGTG
CGCCTGTTGC GGGTGGATAG TGCGGGGGAT CTCCATTGGG CCCCGGTGCC CCGGCGGACC
ATGGCCCGGC TCGGCGGTGG CAGCAGCGAG GCCTGGCGCC CCATCTTCGA TGTCACCCCG
GGGCAGTACC TGTTGCGAAT CGAGAGCACC CAGGCACTGC GCTTCGATCT CCGCCTGCAG
TCCCCGGAGG CGCTGGTGGG CGACTGGCGT GCCTTTACCC TGGCGCAGGG CCTCTTCCTG
GGGCTGGTCC TGGCCCTGGC GGCCTACAAC ACCATCCTGC TATTCCGGCT CAGGGATGCG
AGCTACCTCT GGTACGTCGG CTTCATTCTC GGCCTCGCCG GCTACTTCGT GTTTCAGAAG
GGGCTCACCC ACGAGTTCTG GCCCGGCCTG GGGATAGCGC TCAACGAGGC GCTGATGTTC
ACCGCCCTTT CGCTGGGCTG CGCCAGCGCT ATGTGGTTCT GCCGCCGTTT CCTGATGACC
GAGCAACGCG ACCCGGCAAT GGATCGCCTG TTGCCGATAG CCGCCCTCTG CAGCCTCGCC
CTGGCCCCGC TGGCTTGGGG CCTTCCCGGC CATGCCACAC TGCTTTACGC CAGCGCCATC
GGACTGCTGG CCATGGCCAG CTACCTCTTC GCCACCGCGC GCGCAATCCG CGACCATGAC
TTCCCACCCG CACGCTGGCT GCTATTGGCC TGGCTCGTCA TGGTGGTGGG GGCCCTGCTC
TTCACACTGG CCGGCCTGGG GCTGGTCCCT CATCACTTCG TAACGTACTA CGGCTTCCAG
ATCGGCGTAA GCCTGCAGGC GGTGCTCCTG TCATTGGCCC TGGCCGACCG CATCGGCCTG
CTCCAGGCGG AGCGGGAGGC GCTGCTGAAT GAGCAGGCGC AGCTGCGCCT GACGGCCTAC
ACCGATGGTC TCACCGGGTT GTACAACCGA CGCTACCTGG ACGAATTCCT GGCCCGTGCC
GTGGAGGACG CCGAACGCCG GCAGCGGGAG CTGGCCGTAG TGATGCTGGA TCTGGACGAC
TTCAAGCCGT TCAACGACCG CTGGGGCCAC CAAGTGGGGG ATCGCGCCCT GCAACACCTG
GCCTACCTGA TGCAAGAGGT GGTACGCGGC ATCGATCCGG TGTGCCGCTA TGGGGGGGAG
GAGTTCCTGC TCATCCTGCC CGACCGCGGG CTCAAGGAGG CGGAGATTGT GGGGCGCCGG
CTGCTCACCA ACCTGGCCTC CCGGCCGATG ACCGGGCCGT GCCACCCGCC CCTGACCCTC
ACGGCTACCG CCGGCGCCAC CGCACATCGG CCAGGGGACA ATGCCGCGCG GCTGCTGGAA
CGGGCGGATG CCGCCCTTTA TGAGGGCAAA CGGGCCGGCA AGAACCGCCT GGTCACGGCC
GCGTGA
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| Protein sequence | MATGNTTGNR GYRRDRPLAA WLIALFLALP GLAGAELQLK RLDHHDPHPP PVHLLPAGQV
LDASRPINLG LSSRPVWLHL EISAPPPRVL HLDNPLLHDV RLLRVDSAGD LHWAPVPRRT
MARLGGGSSE AWRPIFDVTP GQYLLRIEST QALRFDLRLQ SPEALVGDWR AFTLAQGLFL
GLVLALAAYN TILLFRLRDA SYLWYVGFIL GLAGYFVFQK GLTHEFWPGL GIALNEALMF
TALSLGCASA MWFCRRFLMT EQRDPAMDRL LPIAALCSLA LAPLAWGLPG HATLLYASAI
GLLAMASYLF ATARAIRDHD FPPARWLLLA WLVMVVGALL FTLAGLGLVP HHFVTYYGFQ
IGVSLQAVLL SLALADRIGL LQAEREALLN EQAQLRLTAY TDGLTGLYNR RYLDEFLARA
VEDAERRQRE LAVVMLDLDD FKPFNDRWGH QVGDRALQHL AYLMQEVVRG IDPVCRYGGE
EFLLILPDRG LKEAEIVGRR LLTNLASRPM TGPCHPPLTL TATAGATAHR PGDNAARLLE
RADAALYEGK RAGKNRLVTA A
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