| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1230 |
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| Symbol | |
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| ID | 4269761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1433777 |
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| End bp | 1434862 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638125980 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_742069 |
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| Protein GI | 114320386 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.121054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCCA ACATCCTGAT CACCCCGGGC GACGGTATCG GTCCGGAGAT CGTGGCCGAG
GCGCGCAAGC TGCTGGAGGC CCTGCGTGAC GACTTCGGCT TCGACTGCAC TTTGGAAGAG
GCCCCCATCG GCGGCGCTGG CTACGAGGCG CATGGCAAGC CGCTGCCGGA AGAGACCCTG
GCTCTCGCCC GGGAGGCCGA TGCCATCCTA TTGGGTGCCG TGGGTGGGCC GCGCTGGGAA
CAGCTGGATC GCCCCCTGCG TCCCGAACGC GGCCTCCTGG CCATCCGTGC GGAGTTGGGC
CTGTTCGGCA ACCTGCGTCC AGCCATCCTC TATCCGCAAC TGGCCGAGGC CTCCAGCCTG
CGCCATGAGA TCGTCGCCGG CCTGGACATC ATGATCGTCC GGGAGCTGAC CGGCGGCATC
TACTTCGGTG AGCCCCGGGG CATCCGCAGG CTGGAGAACG GCGAACGCCA GGGTTACAAC
ACCATGGTCT ACAGCGAGTC GGAGATCGAC CGCGTGGGCC GGCTGGCCTT TGACATCGCG
AGCAAGCGCG GCAGCCGAGT CTGCTCCGTG GACAAGGCCA ACGTGCTGGA GGTCTCCGAA
CTCTGGCGTG AGGTGATGGA ACGCGTGGCC CGGGATTACC CCGGTGTCGA GCTGAGCCAC
ATGTACGTGG ACAACGCCGC CATGCAGTTG GTGCGTGCGC CCAAACAGTT CGACGTGGTG
GTCACCAGCA ATCTGTTCGG TGACGTGCTC TCGGACTGTG CCGCCATGCT CACCGGCTCC
ATTGGCATGC TGCCCTCCGC CTCGCTGGAT GTGAACAGCA AGGGGCTGTA TGAGCCGGTG
CACGGTTCCG CGCCGGACAT CGCCGGCAAG GGGCTGGCCA ATCCGCTGGC CACCCTTCTG
TCAGTGGCCA TGATGCTGCG CTACAGTCTG GATCAGGGCG CCCTCGCCGA CCGGGTGCAG
CAGGCGGTGG GTGATGTGCT CAACCAGGGG CTGCGCACGC CGGATATCGC CGCCCGCCAG
TCGCGCACCG TCAGCACCGC CGAGATGGGT GACGCGGTGG TGGCCGCGCT GCGTGCCCGG
GGCTGA
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| Protein sequence | MTANILITPG DGIGPEIVAE ARKLLEALRD DFGFDCTLEE APIGGAGYEA HGKPLPEETL
ALAREADAIL LGAVGGPRWE QLDRPLRPER GLLAIRAELG LFGNLRPAIL YPQLAEASSL
RHEIVAGLDI MIVRELTGGI YFGEPRGIRR LENGERQGYN TMVYSESEID RVGRLAFDIA
SKRGSRVCSV DKANVLEVSE LWREVMERVA RDYPGVELSH MYVDNAAMQL VRAPKQFDVV
VTSNLFGDVL SDCAAMLTGS IGMLPSASLD VNSKGLYEPV HGSAPDIAGK GLANPLATLL
SVAMMLRYSL DQGALADRVQ QAVGDVLNQG LRTPDIAARQ SRTVSTAEMG DAVVAALRAR
G
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