| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1221 |
|---|
| Symbol | |
|---|
| ID | 4269752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1422923 |
|---|
| End bp | 1424869 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638125971 |
|---|
| Product | putative serine protein kinase, PrkA |
|---|
| Protein accession | YP_742060 |
|---|
| Protein GI | 114320377 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2766] Putative Ser protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.229605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTG CCGAAGCGCT GATTGCACAG TACGCCAGGG CTTACGAGAA ACGCCAGGAG
CACGAGATGA GCCTGGCGGA GTATCTCGAG CAATGCCGGG ACAACCCATT GATGTATGCC
ACGGCCGCGG AGCGGCTGGT GGAGGCCATC GGGGAGCCCA AGGTGGTGGA CACGGCCAAG
GACGAGCGCC TGGGCCGGAT CTTCATGAAC CGGACCATCA AGCTCTACCC AGCCTTCCAC
GACTTCTACG GCATGGAGGA GACCATTGAG CGCATCGTGG GCTTCTTCCG CTATGCGGCC
CAGGGGCTGG AAGAGCGCAA GCAGATCCTG TACCTATTGG GCCCGGTGGG TGGTGGCAAG
TCGTCACTGG CCGAGCGCTT GAAGAGCCTC ATGGAGCACT GTCCCATCTA CGTCCTCAAG
GCGGGCGAAG AGCTGTCGCC GGTCTTCGAG AGCCCCCTGG GGCTGTTCGA CCCGGAGACC
ATGGGTGAGG AGCTGGAGCA GCGCTTCGGC ATCCCCCGCC GGCGGCTCAC CGGGCTTGTC
TCGCCCTGGG CGGTTAAGCG CCTGGATGAG TACGGTGGTG ATATCTCGCG GTTCAAGGTG
GCCCGGGTCT ACCCCTCTAA ACTGCGCCAG ATCGGCATCG CCAAGACCGA ACCGGGGGAT
GAGAACAACC AGGATATCTC CTCACTGGTG GGCAAGGTGG ACATCCGCAA GCTGGAGCTC
TACAGCCAGA GCGACACCGA TGCCTACAGC TATTCCGGCG GCCTCAACCG GGCCAACCAG
GGCCTGCTGG AGTTCGTGGA GATGTTCAAG GCGCCGATCA AGATGCTCCA CCCCTTGCTC
ACCGCCACCC AGGAGGGCAA TTACGCGGGC AGCGAGAACA TTGGCGCCAT CCCCTTCCAG
GGCATCATCC TGGCCCACTC CAACGAAGCG GAGTGGCAGA CCTTCCGTAA CAACAAGAAC
AACGAGGCCT TCATCGACCG GATTTCGGTC ATCAAGGTGC CCTACTGCCT GCGGGTGGAT
GAGGAGGAGC TCATCTACCG AAAGCTGATC CAGAACAGTG AGCTGGCGGA CGCGCCCTGT
GCGCCGGGCA CCCTGGACAT GCTCGCCCGC TTTACGGTGT TGACCCGCCT GAAGGAGCAT
GAGAACTCGA ACCTCTACTC CAAGATGCGG GTCTACAACG GCGAGAGCTT GAAGGATACC
GACCCGCGGG CCAAGTCGAT GCAGGAATAC CGCGACCAGG CGGGGGTCGA CGAGGGCATG
GACGGGGTCT CCACCCGCTT CGCCTTCAAG GTGTTGTCGG AGACCTTCAA CTTCGATACC
CGCGAGGTGG CGGCCGACCC GGTGCACCTG CTCTACATGA TGGAGCAGGC CATCAAGCGC
GAGCAGCTCC CGGAGGAGAC CGAGCGCAAG TACCTGGAGT TGATCAAGGC CGAGCTGGCG
CCGCGCTATG CGGATTACAT CGGCAACGAG ATCCAGAAGG CCTATCTGGA ATCCTATACC
GATTTCGGCC AGAACCTGTT CGAGCGCTAC GTGGCCTTCG CTGACGCCTG GATCGAGGAC
CACGACTACA AGGACCCGGA CACCGGTCAG CTGATGGACC GCCAGACCCT GAACCAGGAG
CTGTCGAAGA CAGAAAAGCC GGCCGGCATC GCGAACCCCA AGGACTTCCG CAACGAGGTG
GTGAAGTTCG CCCTGCGGGC CCAGGCCCAG CGCGGCGGCG ACATGCCCCG CTGGACCAGC
TACGAGAAGA TCCGCGAGGT GATCGAGAAG CGCATGTTCA GTCAGGTGGA GGACCTGCTG
CCGGTGATCA GCTTCGGCAG CAAGGCGGAC TCCGAGACCG AGCGCAAGCA CACCGAGTTC
GTACAGCGCA TGGTGGAGCG GGGGTACACC CAGCGCCAGG TGCGCCGGCT GGTGGAATGG
TACATGCGGG TCAAGCAGGC CGGGTAA
|
|---|
| Protein sequence | MDSAEALIAQ YARAYEKRQE HEMSLAEYLE QCRDNPLMYA TAAERLVEAI GEPKVVDTAK
DERLGRIFMN RTIKLYPAFH DFYGMEETIE RIVGFFRYAA QGLEERKQIL YLLGPVGGGK
SSLAERLKSL MEHCPIYVLK AGEELSPVFE SPLGLFDPET MGEELEQRFG IPRRRLTGLV
SPWAVKRLDE YGGDISRFKV ARVYPSKLRQ IGIAKTEPGD ENNQDISSLV GKVDIRKLEL
YSQSDTDAYS YSGGLNRANQ GLLEFVEMFK APIKMLHPLL TATQEGNYAG SENIGAIPFQ
GIILAHSNEA EWQTFRNNKN NEAFIDRISV IKVPYCLRVD EEELIYRKLI QNSELADAPC
APGTLDMLAR FTVLTRLKEH ENSNLYSKMR VYNGESLKDT DPRAKSMQEY RDQAGVDEGM
DGVSTRFAFK VLSETFNFDT REVAADPVHL LYMMEQAIKR EQLPEETERK YLELIKAELA
PRYADYIGNE IQKAYLESYT DFGQNLFERY VAFADAWIED HDYKDPDTGQ LMDRQTLNQE
LSKTEKPAGI ANPKDFRNEV VKFALRAQAQ RGGDMPRWTS YEKIREVIEK RMFSQVEDLL
PVISFGSKAD SETERKHTEF VQRMVERGYT QRQVRRLVEW YMRVKQAG
|
|---|
| |