| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1219 |
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| Symbol | secF |
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| ID | 4269750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1421127 |
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| End bp | 1422071 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638125969 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_742058 |
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| Protein GI | 114320375 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.417925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTTT TCAAACGCGA ACCCCGCATC GACTTCCTGG GCAAGCGGCG CCTGGGGGTG
GTGTTGTCGG CCCTGCTGCT GCTCGCCTCC ATCGGTTCGC TGGCGATGCA GGGGCTGAAC
CTGGGTATCG ACTTCACCGG CGGCACGGTG GTGGAGGTGG GCTATCCGGA GGCCGCGGAT
CTGGGCCGCA TCGACGGGGT GCTGGAGGAT GCCGGTTACG GCGATGCCGT CACCCAGTTT
TTCGGCACCC AGCGGGATGT GATGATTCGG GTGCCACCCC GGGACGTGGA TGAGAGCGCG
GTCATCAGTG AGGAGGTGCT GGCGGCCTTG CAGGCGGATA GCCCGGACGC GGAGCTGCGC
CGGGTGGAGT TTGTCGGCCC GCAGGTGGGC CGCGAGCTGA CCGAACAGGG ATTGTTGGCC
ATGCTCTATG CCCTGGGCGG TATCCTGGTC TACGTGGCCT TCCGCTTCGA GTACCGGTTT
GCCATTGGTT CGGTGGCGGC GCTGTTGCAC GACGTCATCC TGGTGCTGGG GTTCTTCTCC
ATCACCCGGA TGCAGTTCGA CCTCACCGTG CTGGCGGCGG TCCTGGCCAT CATCGGTTAT
TCGCTCAACG ACACCATCGT GGTGTTCGAC CGGATCCGTG AGAACTTTCT CAAGTTGCGC
AAGGCCGGGC CCAGGGAGGT GATGAACATC TCCATCAACC AGACCCTGTC ACGGACCCTG
ATCACCTCAT TTACCACCCT GCTGGTGGTG GGTTCGCTGA TGCTGGTCGG CGGTGAACTG
ATCCGCGGCT TTGCCACCGC GCTGCTGGTC GGCGTGCTTA TTGGGACCTA CTCCTCGATC
TATGTGGCCA GCGCCTCGGC CCTGGCACTG GGGGTCACCA AGTACGACCT GTTGCCCCCG
GAAAAGGAGG AGGACCAGGG CGAGGGTCAG GAAGAGCGAC CCTAG
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| Protein sequence | MELFKREPRI DFLGKRRLGV VLSALLLLAS IGSLAMQGLN LGIDFTGGTV VEVGYPEAAD
LGRIDGVLED AGYGDAVTQF FGTQRDVMIR VPPRDVDESA VISEEVLAAL QADSPDAELR
RVEFVGPQVG RELTEQGLLA MLYALGGILV YVAFRFEYRF AIGSVAALLH DVILVLGFFS
ITRMQFDLTV LAAVLAIIGY SLNDTIVVFD RIRENFLKLR KAGPREVMNI SINQTLSRTL
ITSFTTLLVV GSLMLVGGEL IRGFATALLV GVLIGTYSSI YVASASALAL GVTKYDLLPP
EKEEDQGEGQ EERP
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