| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1204 |
|---|
| Symbol | |
|---|
| ID | 4270692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1402892 |
|---|
| End bp | 1403665 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638125953 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_742043 |
|---|
| Protein GI | 114320360 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0967348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTA TCCCGGGCGA CATCGCGGTG GCGGTCTCCG GCCTGGAAAA CCGCTTCGGC
AGTACCACGG TGCACCAGGA CCTGGATCTG CAGGTCCGGC GGGGCGAGAT CCTCGGCCTG
GTGGGCGGCA GCGGCTCGGG CAAGACGGTA TTGCTGCGCA GCATGCTGTT GTTGCACCGC
CCCCAGGCCG GGGAGATCCA CCTGCTGGGG ACCCCCACCC GGTCCCTCGG TCGGGGCGAG
GAGAAGGCCC TGCGCCAGCG CATGGGCGTG CTCTTCCAAC AGGGGGCGCT GTTTACCGGG
CTCACCGTCA AGGAGAACGT CAGCCTGCCG CTCTGGGAAC ACACCCGGTT CGATGCCGCC
ACGGTCGAGG ACCTGGCGAT GCTGAAGATC CAACTTGCGG GGTTCCCGCT GGATGCGGCT
CACCTTTACC CCAGCGAACT GAGCGGCGGC ATGGTGAAGC GCGCCGCCCT GGCCCGCGCC
CTGGCGTTGG ACCCGGAGCT GCTCTTTCTC GACGAGCCCA CCGCCGGACT GGACCCGGTC
AGTGCCGGCG CCTTTGACGA ACTGATCGCG GAATTGCACA AGCTGCTGGG GCTTACGGTT
ATCATGGTCA CCCACGACAT GGATGCCCTT TGGGCCACCA CCCACCGGGT GGCCTTTCTG
GGCGACCGCC GGGTCCTGGC CGTGCAGCCC ATCGAGCAGC TTGCGCGCAA TGACCACCCG
CTGATCAAGG CCTACTTCGG TGGATCGCGC ACCGCCGCCT GGAGGGACCG CTGA
|
|---|
| Protein sequence | MSAIPGDIAV AVSGLENRFG STTVHQDLDL QVRRGEILGL VGGSGSGKTV LLRSMLLLHR
PQAGEIHLLG TPTRSLGRGE EKALRQRMGV LFQQGALFTG LTVKENVSLP LWEHTRFDAA
TVEDLAMLKI QLAGFPLDAA HLYPSELSGG MVKRAALARA LALDPELLFL DEPTAGLDPV
SAGAFDELIA ELHKLLGLTV IMVTHDMDAL WATTHRVAFL GDRRVLAVQP IEQLARNDHP
LIKAYFGGSR TAAWRDR
|
|---|
| |