Gene Mlg_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1202 
Symbol 
ID4270690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1401330 
End bp1401956 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID638125951 
ProductABC-type uncharacterized transport system auxiliary component-like protein 
Protein accessionYP_742041 
Protein GI114320358 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.203134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.087482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT GCCTGACGGC CCTGATTGCC GCCCTGACCC TGGCCCTCAG CCTGAACGCC 
TGCGGCCTCG CGTTGCCGGG CCCGGCCGAG TCGCCGCGTA CCTACAGCCT GACCTGGGCG
CCCAGCGAGG CCCCGGGCGG ATCCGAACCC CTGGCGGGCG CCGTGCGGGT GATGGCAACC
CAGGCGGCGC CCGGCTACAC CAGCAGTGCC ATGCGCTACC GCCGCGATGA CTGGGAACTG
CAACGTTTCG CCCACCACCA GTGGGTGGAG CCCCCGGCGC GGATGCTCAC TCCGGCGCTG
GTCGCAGTGC TGGAGCACGA CGGCCCGTTC CGCCAGGTGA TTCACGGCCC CACCGTGGTC
GACGCCCCCT TGCGCCTGCA CACGGAGCTG AAACGCCTGG AACACCGCTT CGAGCACGAC
GAGGACGCCG GCCGGGTGGT GTTAACATTG CGCATCCAGC TGCTGGACAG CGAGGCCGGC
GAGGTGCTCA CCACCCGCCG TTTCCACGCC GAGGTGACCG CCGAACGGCG CCACCCGGTG
GCCGGCGCCA AGGCCGCCAA CCGGGCCCTG GCCGAACTGC TCCCGCAGAT CACCGACCAC
CTGAGAACCG CCCTGGAAGA ACGCTGA
 
Protein sequence
MTRCLTALIA ALTLALSLNA CGLALPGPAE SPRTYSLTWA PSEAPGGSEP LAGAVRVMAT 
QAAPGYTSSA MRYRRDDWEL QRFAHHQWVE PPARMLTPAL VAVLEHDGPF RQVIHGPTVV
DAPLRLHTEL KRLEHRFEHD EDAGRVVLTL RIQLLDSEAG EVLTTRRFHA EVTAERRHPV
AGAKAANRAL AELLPQITDH LRTALEER