Gene Mlg_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1189 
Symbol 
ID4270324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1390033 
End bp1391025 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content69% 
IMG OID638125938 
Productouter membrane protein 
Protein accessionYP_742028 
Protein GI114320345 
COG category[S] Function unknown 
COG ID[COG3528] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.898492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.157549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGA TAGCCCCCCT GCTCAGTAGC CTCCTGCTAG CGGCAAGCAT AGCCCTTCCC 
GGCCAGGTGG TCGCGGAGGA CACCACGCTG ATCCTCGAGT ACGAAAACGA TCTGTTCGGC
GGCGATGACC GCTGGTACAC CAATGGCGTG CGCGCCACCT GGATGCGCAC GGGCCGCCCG
GGGCTCCTCT ACGACCTGGT CACCCTGGTG GGCGAACGCA GCCGCCTGGT CGATCCGGGA
AAACCGATAA GCTACAGCTT CTCCCTGGGG CAGAACATGT ACACCCCCAA GGACATCACC
GACCCGGACC CGCCGGAGGA CGACCGCCCC TACGCCGGCT GGCTCAACGT CAGCACGGGC
CTGGGCCAGT TGCGCAGTGA CAGCCTGACC CGGGTGATGG TCACGGTGGG GATGGTTGGC
CCGGCCTCGC TGGCGAAACG CACCCAGAAG GAGGTGCACC GGCTCATCGA CACCGACATG
CCCCGGGGCT GGGACACCCA GTTGCGCAAC GAACCCACCC TGATGGTGAG CGCCGAGCGG
ATCGAGCGCG TCTGGGAGAT GCCCCGGGTC GACGGCTGGG GCGCCGACCT CAACGGCCAC
CTGGGGCTCG CCCTGGGCAC CCCCTTCACC CTGGCCGGCA CCGGGCTGAC CCTGCGCCTC
GGTCGGCACA TGCCCAATGA CTTCTCGCCG CCGCGCATCC AGCCCGCCTT TCCCGGGTCC
ATGCGGTTCG TCCCCGCGGA ACGTTGGGGC TGGTATGTCT TCACTGGCAT CGATGGCCAG
GGCCGGGCCC GTGATGTCTT CCTGGACGGC AACACTTACC GACGCAGCCG CAGCGTACGC
CGCGAGCCCT GGGTGGCCGA GGCCACCGTC GGCCTGGCGG TGGCCAACCG GTGGGCCCGG
CTCGCCTATA CCCACGCCTA CCGCACCCGG GAGTTCAAGG GGCAACCGGA GGACGCCGAG
TACGGGTCAC TGAGCCTCAG CGTGCGCTGG TAG
 
Protein sequence
MRPIAPLLSS LLLAASIALP GQVVAEDTTL ILEYENDLFG GDDRWYTNGV RATWMRTGRP 
GLLYDLVTLV GERSRLVDPG KPISYSFSLG QNMYTPKDIT DPDPPEDDRP YAGWLNVSTG
LGQLRSDSLT RVMVTVGMVG PASLAKRTQK EVHRLIDTDM PRGWDTQLRN EPTLMVSAER
IERVWEMPRV DGWGADLNGH LGLALGTPFT LAGTGLTLRL GRHMPNDFSP PRIQPAFPGS
MRFVPAERWG WYVFTGIDGQ GRARDVFLDG NTYRRSRSVR REPWVAEATV GLAVANRWAR
LAYTHAYRTR EFKGQPEDAE YGSLSLSVRW