Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1154 |
Symbol | |
ID | 4270660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1351843 |
End bp | 1354173 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638125903 |
Product | penicillin-binding protein 1B |
Protein accession | YP_741993 |
Protein GI | 114320310 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGCGAT CACGTCAGAG CCGGCGCAGG GCCACCGGGC GGGGGCGCCC CGGGCGTTTG AAGCGCTGGG GCGCGCGTCT GCTGGGCCTG CTGGTCACGG TCGCCCTGGT GGCGGTGGGC CTGCTGGCCT TGTACGCCAA GTCGCTGGAG CCGGAGCTGC GCCAGCATTT TGAGGGCGGC CGGTGGGCGG TCCCGGCCCG GGTCTACGCC CGCCCCCTGG AGCTTTACGC CGGCAAGGCC CTGTCGCCGG TGGAGCTGCA GGTGGAGCTT GAGGAGCTGG GCTACCGGCA GACGACGTCG GGGCGCCAAC CGGGGAGTTG GAGCCGAAAC GGCGCGGTTT TCCACCTGAG TACGCGCGGC TTTGCCCACC CCGACGGTGA GGAGCCGGCC CGTAGCCTGC GCCTGGCCTT CGATGGGGGG CAGCTGGCCT CGGTGACGGG GTTGGATGAC CGGGAGCGGG TCGGTCTGGC GCGTCTGGAG CCGGCGGTGG TCGGCAGCCT GCACGCGCCC CATCAGGAGG ACCGCTTGCT GGTCCGGCTC GAGCAGGTGC CGGAGACCCT GGTCCGGGCC CTGCTGGTGG TGGAGGACCG CAAGTTCTTC GACCACCACG GCCTCTCCCT CACCGGCATC GCCCGGGCCG CCCTGGCCAA TCTGCGGGCC GGCCGGGTGG TGCAGGGGGG CAGCACCCTG ACCCAGCAGC TGGTCAAAAA CTTCTACCTC AGTGCCGATC AGACCCTGCG GCGCAAGTTC ACCGAGGCGG TGATGGCGCT GCTCCTGGAG CATTACTACG AGAAGGACGA GATCCTGGAG GCCTACTTTA ACGAGGTCTT TCTCGGGCAG CGCGGCGGGC GGGGCGTCCA CGGTTTCGGA TTGGGTGCCG AGTTCTACTT CGGGCGTCCC CTGGATGAGC TCAGCCTCGC CCAGCAGGCC ACGCTGGTGG GGATGGTGCG CGGACCCTCG CACTATAACC CGCGCCGCCA CCCGGAGCGG GCGCGGGAGC GACGGAATCT GGTGCTCACG TTGATGGCGC GTCACGGCAT TATCCCGGGG GACGAGGCGC GGGAGGCCAT GGCGGAGGAT CTGGGGGTCG TGGCCGACGG TCAGCGCCAC CAAGGGCGTT ATCCCGCCTT CATGGACCTG GTGCGCCGCC ACCTGCAACG GGATTACCGC CGGGAGGACC TGATCAGCGA GGGGCTGCAT GTACACACCA CGCTGGCGCC GCGGGTCCAG CGTGCCGCGG AGCGGGCGGT GGACAGCCGC CTGGCCGCAT TCGGTGCGGA AGGATTGCAG GCGGCGCTGG TGTCGGTCTC GGTGGAGGAT GGCGAGGTCA AGGCCGTGGT CGGGGGCGCG GACTACCGCT ACGCCGGCTT CAACCGGGCC CTGGATGCCC GCCGCCCCAT CGGCTCACTG GTCAAGCCGG CGGTCTATCT GGCGGCCCTG CGGGAACCGG GGCAGTACGC CCTGGGGACC GTGCTCAGCG ACGAGCCGGT CACCCTCCGG GATCGCGAGG GCGAGCCCTG GACGCCGCGC AATTACGATG GCGATCACCG GGGTGAGGTG CCGTTATGGG AGGCGCTGTC CGACTCGCTC AACGTGCCCA CGGTGCGTCT CAGCCAGGGG CTGGGCCTGC GCCGGGTGGC CCGCACCTGG GCTGACCTGG GCGGCCGCGT CCCCAACACC CTGTACCCCT CGTTCGTGCT GGGTGCCAGC GAACACAGCG TGTTGGAGAT GGCGCAGGTC TATCAGACCA TCGCCGCCGA GGGCTTCCGG ACCCCGCTGC GGGCGGTGCG GGCGGTCACC GACAGCGACG GCGAGCTGCT CTCCCGCTAT CCCCTGGCCA CCGAACAGGC GGTCGATCCG GCCAGCAGTT ACCTGTTGCA GCATGCCCTG GAGCAGGTGG TGGCGCGGGG CACCGCGCGC GGGTTGCGGT CCTGGTTGGG CGACACCCAC GGCCTTGCGG GCAAGACCGG AACCACCGAC GATTACCGGG ACGCGTGGTA CGCGGGCTAC TCCGGGGATC TGCTCTCGGT GGTCTGGTTG GGGCGGGACG ACAATCAACC GATCGGGCTC ACCGGCAGTG GCGGGGCGAT GCCCGTCTGG GGCGAGCAGT TTCAGGCATT GAGCTTCCGC CGCCTGAACC GCCTGCCCCC CGCTGGCGTG GAGGAGGCCT GGATCGATTA CCGGACCGGG CGGCGCAGTG GCCCGGACTG TGACGGGGCG GTGGCGCTGC CCTATATCAG CGGGCACCTG CCGGCGGAGT CGGTGGTCTG TGCCCGCGAG CCGGACGACG ACGACCGACG GGGCTTCTGG GATCGCGTCT TCCGGCGCTG A
|
Protein sequence | MKRSRQSRRR ATGRGRPGRL KRWGARLLGL LVTVALVAVG LLALYAKSLE PELRQHFEGG RWAVPARVYA RPLELYAGKA LSPVELQVEL EELGYRQTTS GRQPGSWSRN GAVFHLSTRG FAHPDGEEPA RSLRLAFDGG QLASVTGLDD RERVGLARLE PAVVGSLHAP HQEDRLLVRL EQVPETLVRA LLVVEDRKFF DHHGLSLTGI ARAALANLRA GRVVQGGSTL TQQLVKNFYL SADQTLRRKF TEAVMALLLE HYYEKDEILE AYFNEVFLGQ RGGRGVHGFG LGAEFYFGRP LDELSLAQQA TLVGMVRGPS HYNPRRHPER ARERRNLVLT LMARHGIIPG DEAREAMAED LGVVADGQRH QGRYPAFMDL VRRHLQRDYR REDLISEGLH VHTTLAPRVQ RAAERAVDSR LAAFGAEGLQ AALVSVSVED GEVKAVVGGA DYRYAGFNRA LDARRPIGSL VKPAVYLAAL REPGQYALGT VLSDEPVTLR DREGEPWTPR NYDGDHRGEV PLWEALSDSL NVPTVRLSQG LGLRRVARTW ADLGGRVPNT LYPSFVLGAS EHSVLEMAQV YQTIAAEGFR TPLRAVRAVT DSDGELLSRY PLATEQAVDP ASSYLLQHAL EQVVARGTAR GLRSWLGDTH GLAGKTGTTD DYRDAWYAGY SGDLLSVVWL GRDDNQPIGL TGSGGAMPVW GEQFQALSFR RLNRLPPAGV EEAWIDYRTG RRSGPDCDGA VALPYISGHL PAESVVCARE PDDDDRRGFW DRVFRR
|
| |