Gene Mlg_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1100 
Symbol 
ID4269807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1285718 
End bp1286803 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID638125852 
ProductABC transporter related 
Protein accessionYP_741942 
Protein GI114320259 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCG GCGAGAGGGT GCACGGACAG GACGAGGACA TCCTCCTTGA GCTGGACGAC 
ATCGAGTGCC GCTACGACGA CGAGCCGGTC ATCCGCGGGT TGAGCTTCCG GCTGCGGCGC
GGCCAGGTGG CGTGCCTGCT CGGACCCAGC GGCTGCGGCA AGACCACCGC CCTGCGGGCC
ATCGCCGGCT TCGAGCCGGT GCGTGCCGGC GAGATCCGCT TGGCCGGCGA GGTCATCTCC
CGCCCGGGCT ACACCCAGCC CCCGGAGAAT CGCCGGCTGG GGATGGTGTT CCAGGACTAC
GCCCTGTTCC CCCACCTGAA CATCTACGAG AACATCACCT TCGGGCTGCG CGACCACACC
CGGGCGGAGC GCCGGGCCCG GGCGGATGAG CTGTTGGAGC TGGTGGATAT GCGCGGCATG
GGCACCCGCT ACCCGCATGA ACTCTCCGGC GGACAACAGC AGCGGGTCTC GCTGATCCGT
GCGGTGGCCC CCCGCCCCCG CCTGGTGCTG CTCGATGAAC CCTTCTCCAA CCTCGATGTG
GACCTGCGCG AGCGCCTGGC CCGGGAGGTG CACGACATCT TCCGCGACCA GGGGGTCACC
GCCATCCTGG TCACTCACGA TCAGCACGAG GCCTTCGCCG TGGCCGATGT GATCGGCCTG
CTCAAGGACG GGCGCATCGA GCAGTGGGAC ACCCCCTACA ACCTCTACCA CGAACCGGCC
TCCCGCTTCG TGGCCGAGTT CATCGGCCAA GGCGTGCTCA TCCCAGCCAC CCTGCGTGAC
CACAACCGGC TGCAGACCGA GGTGGGCACG CTGCTCGGCA ACCGCGCCTA TCCCTGGCCC
AACGACACGG CCGTCGACAT CCTGCTGCGG CCGGACGATG TGCGCCTCAT GCCGGAATCA
CACCTGAGGG CGCGGGTGGC CAACAGGGCC TTCAAGGGCG CAGAGACCAT CTACACCCTG
CGCCTGGAAA GCGGGCGGCA GGTGCTAGCG CTGGCCCCCA GTCACGACGT GTACCCCGAA
GGCACCGACG TGGGCATCCG CATCGATGCC CAGCACCTGG TCGCCTTCCG TCGCGAGGAG
GAGTAA
 
Protein sequence
MVSGERVHGQ DEDILLELDD IECRYDDEPV IRGLSFRLRR GQVACLLGPS GCGKTTALRA 
IAGFEPVRAG EIRLAGEVIS RPGYTQPPEN RRLGMVFQDY ALFPHLNIYE NITFGLRDHT
RAERRARADE LLELVDMRGM GTRYPHELSG GQQQRVSLIR AVAPRPRLVL LDEPFSNLDV
DLRERLAREV HDIFRDQGVT AILVTHDQHE AFAVADVIGL LKDGRIEQWD TPYNLYHEPA
SRFVAEFIGQ GVLIPATLRD HNRLQTEVGT LLGNRAYPWP NDTAVDILLR PDDVRLMPES
HLRARVANRA FKGAETIYTL RLESGRQVLA LAPSHDVYPE GTDVGIRIDA QHLVAFRREE
E