| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1099 |
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| Symbol | |
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| ID | 4269806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1283605 |
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| End bp | 1285695 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638125851 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_741941 |
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| Protein GI | 114320258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0252232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAAC AGTTGCTGGA GAGCCTGGCC GAGGGGGTCT TCAGCGTGGA TGCCGAAGGC
AACTTCACCT TTCTCAACCG GGCCGCCTGC CGGCTGCTCG GCTTGGCCGA CGAGCAGGTG
GCATTGCGCG CCAATCACCA GGAGTGGGCC CTGCACAGCG GGCCCGACAG TCAGCCGTTG
CCGCCCCGCT CCTCGCCCAT CGATCAGGTG CTGCGCACGG GGTGCGTCCT GAAGGGCTGC
GAGTTGCGGT TCCGGCATAG TGACGGCCAT CCCGTGCCGG TCCTGGTCAA CGCTGCGCCC
CTGTATGGCG AGGAGGGGCG TATCGCCGGG GCGGTGGTCT CGTTTCAGGA TGTCCGCGAG
CGTCAGGTGG CCCGGGAGGC CTTGGAACGC AGGGAGGCGG AGCTGGCGGA GGCGCAACAG
ATCGCGCACT TGGGAAGCTG GGTCTCGGAC TTCGTGCGCA ACGAGATCCG TTGGTCGGAT
GAGGTCTACC GGATCTTCGG CCTGACCCCG GGGGAATGGG GCGGAACCGA GGCCGCCTTT
ATGGAGGCGG TGCATCCGGA GGACCGGGCC CGGGTGCGCC AGGCCATCGA TGAGTCGATG
CGGCCGAACG GCCCGCCCTA TGACATCGAG CACCGTATCC AGCGGCCCGA CGGCAGTGTC
CGAATCGTGC ATCAGAAAGG CACCGTGGCC TTCGACGCCG ACGGTCGCCC GCTGCGCATG
GCCGGGGTGG TGCACGACAT TACGGAGATG CGCGAGGCGG AGCGCCGGCT GCAGTACCTT
TCCCATCACG ACGTGCTCAC CGAGCTGCCC AATCGCACCC TGTTCCAGAT CCGCCTGCGT
CAGGCGATCA GCGAGGCGCA GGCGGAGAAG GGGTGTTTTG CTCTGGTGCA CATCGGCCTG
GATCGGTTCC GGAGCGTTAA CGAGGGAGTG GGCCACCATG CCGGCGATCA GGTCCTGCAG
CAGGTGGCGC GCCGGTTGGA GGCGTGTCTG CGCCCCGGCG AGACCCTGGC CCGACTCGGG
GGGGATGAGT TCGCCGTCCT GCTGGCCGGC GCCGGTGATG ATGCCGAGGT GGCGGCCGGC
GTGGACCGGC TGCTGGCGCC GCTGCAGGAA CTCTTCCGGG TCGGTGAGGA CGAGTTCTAC
GTGCCCGGCT CCGCGGGTGT CGCACTCTAC CCTCATGACT GCAGCAGTCC CGGAGAGCTG
ATGCAGCGGG CCGAGGCCGC CATGCATCGG GCCAAGCAGG AGGAAAGCAC TCGCTTGGCG
TACTACTCCG CGGAGATGAA CCAGCGGGCA CGGGCCCGGG TGGCCCTGGA GAGCCGTCTG
CGCCGGGCAG TGGACCGCAT GGAGGGATTC TATCTCGATT ACCAGCCCCG GGTGGAGACG
GCCACCGGAC GTATCATTGG CTTGGAGGCC CTGTTGCGTT GGCGGGAGGG GGAGGGGCCG
GTCCATTCAC CGGCGACCTT CGTCCCGGTA TTGGAGCAGA CCGGCCTGAT CATGGAATTG
GGCGAGTGGA TCGTCGGCGA GGCCTGCCGT CAGGCCCGGG CCTGGCGACA GGCGGGCCTG
CCGCCTGTGC AACTGGCGGT CAACCTGGCG GCGCCCCAGT TCCGGGACCC GGCGATGCCG
GGGATTATCG AGGGCGCTCT CGGGGAGGCG GGGCTGCCCC CGGGCAACCT GGAGCTGGAG
GTGACCGAGA GCATGCTGAT GCGGGAGGTC ACCTCGGTCA TCGATACCCT CGGGCAGTTC
CGCGATATGG GGGTGCGGGT TGCGATGGAC GACTTCGGCA CCGGCTACTC CTCGCTTGCC
TACCTGCGCC GCTTCCCGAT TGACGTGCTC AAGATCGACC GTTCCTTTGT CAACGACCTG
TACGCCGACG AGAGTGGGGC GGCCATCATC CGCACCATCC TGAGCCTGGC GGACAACCTG
GGCATGGAAT CGGTGGCGGA GGGGGTGGAA CGGCCGGAAC AGCACGCCTT CCTGTGCCGT
GAGGGGTGCC ACGCTGTTCA GGGGTATCTC TTCTCCCGGC CGGCCTCTCC TGAGGTCTGT
GCCCGCATGC TCCGCCGGGG GCGTCTTTCG TTCGAAGGCG GGGGCGGATG A
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| Protein sequence | MREQLLESLA EGVFSVDAEG NFTFLNRAAC RLLGLADEQV ALRANHQEWA LHSGPDSQPL
PPRSSPIDQV LRTGCVLKGC ELRFRHSDGH PVPVLVNAAP LYGEEGRIAG AVVSFQDVRE
RQVAREALER REAELAEAQQ IAHLGSWVSD FVRNEIRWSD EVYRIFGLTP GEWGGTEAAF
MEAVHPEDRA RVRQAIDESM RPNGPPYDIE HRIQRPDGSV RIVHQKGTVA FDADGRPLRM
AGVVHDITEM REAERRLQYL SHHDVLTELP NRTLFQIRLR QAISEAQAEK GCFALVHIGL
DRFRSVNEGV GHHAGDQVLQ QVARRLEACL RPGETLARLG GDEFAVLLAG AGDDAEVAAG
VDRLLAPLQE LFRVGEDEFY VPGSAGVALY PHDCSSPGEL MQRAEAAMHR AKQEESTRLA
YYSAEMNQRA RARVALESRL RRAVDRMEGF YLDYQPRVET ATGRIIGLEA LLRWREGEGP
VHSPATFVPV LEQTGLIMEL GEWIVGEACR QARAWRQAGL PPVQLAVNLA APQFRDPAMP
GIIEGALGEA GLPPGNLELE VTESMLMREV TSVIDTLGQF RDMGVRVAMD DFGTGYSSLA
YLRRFPIDVL KIDRSFVNDL YADESGAAII RTILSLADNL GMESVAEGVE RPEQHAFLCR
EGCHAVQGYL FSRPASPEVC ARMLRRGRLS FEGGGG
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