| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1097 |
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| Symbol | |
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| ID | 4269804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1279186 |
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| End bp | 1281393 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638125849 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_741939 |
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| Protein GI | 114320256 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00537939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACATA CCGGACTGAC ACAATTACCC GACGAGGCCC AGCTGGATTA CGACAGCTGG
GTAGCGCAGC TGCCTGCCCG GCTGGACGAG GACGACCGCC GGGTGCTGGC CGAGGCCTGG
CGTCTCGCCG AGGCCGGGTG CAAGTCGGCG CAGCGTCCCA CCGGTGACAG CTATTTCGAG
CACGGGGTGG CGGTGGCCAC CATCCTCTCC GGGTTGAGGC TGGACGCCGC CACCCTGGCC
GCCGGCCTGC TGCACGACCT GCCCACCCTG GATGACACCG CCTTGGGCCG TATCCGCAAG
CAGCTCGGCG ATGACGTGGC CCACCTGGTG GCGGGGGCTT CGCGCATGCA GGACATCTCC
CGTTTCCACG ACCCGGGCCA GTTGTCCGGT GAATCGGAAC GTGCCGAGGG GCTGCGCAAG
ATGCTGCTGG CCATGGCCTC GGACGTGCGG GTGGTGTTCA TTACCCTGGC CGAGCGGCTG
CACGACCTGC GCAGCATCCG CGACCTGCCC GAGACGCTGC AGCAGCGCAT CGCCCAGGAG
ACCCGGGACA TCTACGCCCC TCTGGCCAAT CGCCTGGGCA TCTGGCAGCT CAAGTGGGAG
TTGGAGGACC TGGCCTTCCG TTACCTGCAG CCCGATGTCT ACAAGCAGGT GGCCAAGCTG
CTGGCGGAGC GCCGGCTGGA CCGCGAGGCC TACATCGAGC GGGTCCGCAG GGAACTGCAG
GAGGCCCTGA GGCAGGCCGG AATCGACGCT GAGGTGGTGG GCCGGCCCAA GCATATCTAC
AGCATCTGGC GGAAGATGCA GCGCAAGGGC CTGCGCTTCG AGGAGCTCTA CGACCTGCGC
GCCCTACGGG TGCTGGTGGA GGACGTGGGC ACCTGTTACG CGGTGCTGGG GGTGGTGCAC
AGCCTCTGGA AGCACATCCC CAAGGAGTTC GATGACTACA TCGCCACGCC CAAGGAGAAC
AATTACCGCT CCCTGCATAC CGCGGTGGTC GGCCCCGAGG GCAAGACCCT GGAGGTGCAG
ATCCGCACCT ACGCCATGCA CCAGGAGGCG GAACTGGGCA TCGCCGCCCA TTGGCGCTAC
AAGGAGGGCG GCCGCCAGGA CCGCGATTTT GAACAGAAGA TCGCCTGGCT GCGCCAGATC
CTGGAGTGGG GGCAGGAGGA GAACGGCGCC GAGGACTTCA TCGATCGTTT CAAGGCCGAG
GTGTTCGAGG ACCGGGTCTA CGTCATCACG CCCCAGGGTG ACGTGGTGGA CCTGCCCCGG
GGGGCCACCC CGCTCGATTT TGCCTATCAC ATCCACTCCG ATGTCGGGCA TCACTGCCGC
GGGGCCAAGG TCAACGGCCG TATGGTCCCG CTGACCCATA CCCTCAAGAG CGGCAGTCAG
GTGGAGATCA TCACCTCACG CTCAGCCACC CCCAGCCGCG ACTGGCTCAA CCCGTCGCTG
GGCTACCTGC GCACCTCCCG GGCGCGGGCC AAGGCCAGGG CCTGGTTCCG CCAGCAGGAT
CACGACAAGA ACGTCCAGGC CGGACGTAAC ATCCTCGACC GGGAGCTCCA CCGGCTGGGG
CTGCAGGACG TGCCCTTGGA CGAGCTGGCG CAGAAGACCC GCTTCCGCCG GCTGGAGGAG
TTCCTGGCGG CACTGGGGCG CGGTGATATC ACGGCCGGTC AGATCGCCAG CATCGTCGGC
GAGCGGGTAT TGCCCCGGCC CGAGGGCGAG GAACCGTTGC AGGTCAGCCG CAAGCGCAGC
ACCGTCTCCA GCACGGGCGG TGACGAGGTG ACCATCTACG GGGTGGACAA CCTGCTGACC
CGGCTGGCCC GCTGCTGCAC GCCCGCGCCC GGTGACCCCA TCATCGGCTT CCTAACCCGG
GGCCGCGGCG TGACCATTCA CCGCCGGGAC TGCCCCGAGG TGGGCCGTGC TCGCTCCGAT
GCGCCGGAAC GGCTGATCGA TGTCACCTGG ACCGATCCGG GGGGCAAGCG TTACCCGGTG
AATATCATCA TCCACACGCC GGATCTCCAG AGGGCCCTGC GCGACGTCTC CAAGGTGCTG
ACCAATGAGC AGATCCGACT GCTGGGGATC AACACCCAGT CGGATTCCCG CGGTGAGCAC
GCCTCGCTGG ATCTGTCACT GGAGGTGGCG GACGTCAACC AGATGAGCCG CCTGATGAAC
CGCATCGGCA GTCTGCCCCA CGTGCAGGAC GTGCACCGCA AGGGCTGA
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| Protein sequence | MVHTGLTQLP DEAQLDYDSW VAQLPARLDE DDRRVLAEAW RLAEAGCKSA QRPTGDSYFE
HGVAVATILS GLRLDAATLA AGLLHDLPTL DDTALGRIRK QLGDDVAHLV AGASRMQDIS
RFHDPGQLSG ESERAEGLRK MLLAMASDVR VVFITLAERL HDLRSIRDLP ETLQQRIAQE
TRDIYAPLAN RLGIWQLKWE LEDLAFRYLQ PDVYKQVAKL LAERRLDREA YIERVRRELQ
EALRQAGIDA EVVGRPKHIY SIWRKMQRKG LRFEELYDLR ALRVLVEDVG TCYAVLGVVH
SLWKHIPKEF DDYIATPKEN NYRSLHTAVV GPEGKTLEVQ IRTYAMHQEA ELGIAAHWRY
KEGGRQDRDF EQKIAWLRQI LEWGQEENGA EDFIDRFKAE VFEDRVYVIT PQGDVVDLPR
GATPLDFAYH IHSDVGHHCR GAKVNGRMVP LTHTLKSGSQ VEIITSRSAT PSRDWLNPSL
GYLRTSRARA KARAWFRQQD HDKNVQAGRN ILDRELHRLG LQDVPLDELA QKTRFRRLEE
FLAALGRGDI TAGQIASIVG ERVLPRPEGE EPLQVSRKRS TVSSTGGDEV TIYGVDNLLT
RLARCCTPAP GDPIIGFLTR GRGVTIHRRD CPEVGRARSD APERLIDVTW TDPGGKRYPV
NIIIHTPDLQ RALRDVSKVL TNEQIRLLGI NTQSDSRGEH ASLDLSLEVA DVNQMSRLMN
RIGSLPHVQD VHRKG
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