Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1088 |
Symbol | |
ID | 4270033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1268146 |
End bp | 1270173 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638125840 |
Product | excinuclease ABC subunit B |
Protein accession | YP_741930 |
Protein GI | 114320247 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA GGTTCCAGCT CCAAAGCCGC TTCCAACCCG CCGGCGACCA GCCCACGGCC ATCGCCTCGC TGGTCGAGGG CCTCAACGCC GGCGAACGCC ACCAGACCCT GCTCGGCGTC ACCGGCTCCG GCAAAACCTT CACCATGGCC AACGTCATCC AGGCCGTGCA GCGGCCTGCC ATGGTCCTGG CCCCCAACAA GACCCTCGCC GCCCAACTCT ACGGCGAGAT GCGCGAGTTC TTCCCCAAGA ACCGCGTCGA GTACTTCGTC TCCTACTACG ACTACTACCA ACCCGAGGCC TACGTCCCGG CCTCCGACAC CTTCATCGAG AAGGACGCCT CGGTGAACGA ACACATCGAA CAGATGCGCC TGTCCGCCAC CAAGGCCATC CTGGAACGGC AGGACACCAT CATCGTCGCC TCCGTCTCCT CCATCTACGG CCTGGGCGAC CCCCAGTCCT ACATGGCCAT GCTGCTGCAC CTGGTGCGCG GCGAGACCAT CGACCAGCGC CAGATCCTGC GCCGCCTGGC CGAAATGCAA TACACCCGCA ACGACATGGA CTTCACCCGC GGCACCTACC GCGCCCGGGG CGAGGTCATC GACATCTTCC CGGCCGACGC CGAGGACGAG GCCGTGCGGG TGGAACTGTT CGACGACGAG ATCGAAGAGC TGTCGCACTT CGACCCCCTC ACCGGCGAAG TGCTGCGCCG CGTGCCGCGC CTGACCATCT ACCCCAAGAC CCACTACGTC ACCCCCCGCG GCCAGGTGCT GCGCGCCATC GACGCCATTA AGGAGGAACT GCGCGACCGG CTGGCGGAGC TGCGCGCCGC CGACAAACTG GTGGAGGCCC AGCGCTTGGA GCAGCGCACC TTGTTCGATC TGGAGATGAT GCACGAGCTG GGCTACTGCA ACGGCATCGA GAACTACTCC CGGCACCTCT CCGGCCGCGC CCCCGGTGAG CCGCCGCCCA CCCTGTTCGA CTACGTGCCT GAGGACGCCG TGGTCTTCAT CGACGAATCC CACGTCACCA TTCCGCAGTT GGGCGGCATG TACAAAGGCG ACCGCAGCCG CAAGCAGACC CTGGTGGACT ACGGCTTCCG CCTGCCCTCG GCCCTGGACA ACCGGCCGCT GAAATTCGAG GAGTGGTTGC GCCTGGCACC CCAGTGCGTG CTGGTCTCCG CCACCCCCGG CCCCTGGGAG CATGAGCACA GCCAGCGGGT GGTGGAGCAG GTGGTGCGCC CCACCGGCCT GCTCGATCCG GAAGTGGAGG TGCGCCCGGC GCTCAGCCAG GTGGACGACG TCTACGGCGA GATCACCGAG CGCGCCCGAC GCGACGAGAG GGTGCTGGTC ACCACCCTGA CCAAGCGCAT GGCCGAGGAC CTGACCGAAT ACCTGCACGA GAACGGCGTG CGGGTGCGCT ACCTGCACTC CGATGTGGAC ACCGTGGAGC GCACCGAGAT CATCCGCGAT CTACGCCTGG GCGAGTTTGA CGTGCTGGTG GGCATCAACC TGCTGCGCGA GGGCCTGGAC ATCCCCGAGG TGTCGCTGGT GGCCATTTTG GATGCGGACA AGGAGGGGTT CCTGCGTTCC GAGCGCTCGC TGATTCAGAC CATCGGCCGG GCGGCGCGTA ACCTTGGCGG CAAGGCCATC CTTTACGGTG ATGAGATCAC CAACTCCATG CGCCGGGCCA TTGACGAGAC CGAGCGGCGC CGCGCCAAGC AGCAGGCCCA CAACGAGGCC CATGGCATCA CCCCGAAGGG GGTGCGCAAG GACGTGGCCG ATATCATGGA GCGGGGCGGC GCCCCGATAC CGGGCGCGCC GCGGGGCCGT ATCGACAAGG TGGCGGAAGA GGCCGCCAAG TACGGCCGTT ACACCCCGGC CGAGGCGGTC AAGCGCATCA AGCAGCTGGA GAAACAGATG CGCGAGCACG CCCGCAACCT GGAGTTTGAA GAGGCCGCCC AGCTACGCGA CGAGATCAAG CGCCTGGAGC GCTACGCCCT GGGCCGACCC GACGTGGCCA GCGCCTGA
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Protein sequence | MTARFQLQSR FQPAGDQPTA IASLVEGLNA GERHQTLLGV TGSGKTFTMA NVIQAVQRPA MVLAPNKTLA AQLYGEMREF FPKNRVEYFV SYYDYYQPEA YVPASDTFIE KDASVNEHIE QMRLSATKAI LERQDTIIVA SVSSIYGLGD PQSYMAMLLH LVRGETIDQR QILRRLAEMQ YTRNDMDFTR GTYRARGEVI DIFPADAEDE AVRVELFDDE IEELSHFDPL TGEVLRRVPR LTIYPKTHYV TPRGQVLRAI DAIKEELRDR LAELRAADKL VEAQRLEQRT LFDLEMMHEL GYCNGIENYS RHLSGRAPGE PPPTLFDYVP EDAVVFIDES HVTIPQLGGM YKGDRSRKQT LVDYGFRLPS ALDNRPLKFE EWLRLAPQCV LVSATPGPWE HEHSQRVVEQ VVRPTGLLDP EVEVRPALSQ VDDVYGEITE RARRDERVLV TTLTKRMAED LTEYLHENGV RVRYLHSDVD TVERTEIIRD LRLGEFDVLV GINLLREGLD IPEVSLVAIL DADKEGFLRS ERSLIQTIGR AARNLGGKAI LYGDEITNSM RRAIDETERR RAKQQAHNEA HGITPKGVRK DVADIMERGG APIPGAPRGR IDKVAEEAAK YGRYTPAEAV KRIKQLEKQM REHARNLEFE EAAQLRDEIK RLERYALGRP DVASA
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