| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1053 |
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| Symbol | |
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| ID | 4270526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1225998 |
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| End bp | 1227557 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125805 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_741896 |
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| Protein GI | 114320213 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.258962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGG ATTTGAAACG GCGCCTGAAA GCCACCCCTG CTCTCCCTTC TCTCCCACCG
GCAGCGGTCC GTATCCTGGA CATTGCGCGC AGCAACGAGC CCCAGCCGCG CGAACTGTAC
GAGGCCATCC AACTCGATCC GGCCCTTTCC GCGCGCCTGC TGCGGGCCAG CAATTCGCCG
GCCTTTCGCC GGGTGGGCGA GGTGCGCTCG CTCCGCGAGG CCCAGATGGT GCTGGGCTAC
GATGCCACCC TCACCCTCAG TCTGTCCTTC TGTCTGTTCA CCACCATCCG CCGTCTGGAA
GCCGGTCGCC TGGACTATGA ACACTTCTGG CGCCGCTCCG CCTGCGTCGC CAGTGTAGCC
GCACTGATTG CGAAATCGCG CGGGTTGGCC GGTGCAGAGG CAATGCTCGC CGGGCTGTTA
AAGGATATCG GTGTTCTGGT GCTGGACAGC ATCACCCCGG CCGACCACCC CGGCTGGACG
AGTGATGAGC AGGCGGCGGC ACAGCTTGCG GCGGAGGTCG GGGCCTGGCT GATCAATGAA
TGGCGGCTGC CGGACTACCT GGCGAGTGTC AGTTGGGCAA CCCGGGACCT GGACCGGCGG
CTGCCGCATA TCCCCGACGA AGACCAAGCG CTGGTAGAGG TCGTCGGGGT GGCGGACGAG
CTGGTGGGGA TCTGGCTTGC CGACGATACC GGCGGGCAGC TGGACAATAG CCGGGACCTG
GTCGCCCGGC GCTGGGCCTG GTCACCAGAG CAACTCTACC AACTGATCAC CGAGGCCGAC
GAGGCGATCA AGGGCAACCT TGCCCTGCTG GATCTCAGCC AATTCGACGA GCAGATCATG
GTCGGCGTAA TGGACCAGGC GCGGGAGGTG CTACTGTTCC AGAATCTGTC CCAATTCAAA
ACGACCCATG AGGCCAACAG CCAGGCCGAC GCCTTACGCG AACGCGCCCG TCAGCTGGAG
GAATCCAGCC TGCGCGATGA ACTGACCGGC GTCTGGAACC GCCGCAAGCT CTTCTCCTTC
CTGGAGGTCA CCCTGGAGGA TGCCCGCACC GCCGGCACGC CGGTCACCGT CGCCTTCGCC
GACCTGGATC GCTTCAAACC GGTAAACGAC GACTACGGCC ATGCAGCGGG CGATGTTGTC
CTCAACCATT TCGCCCAGAA ACTCTCCCGG CTGGTGCGCG GCGACGACCT AGTCGCCCGC
TACGGCGGCG AGGAGTTCGC TATTGTCATG CCCAACACCG GTGGCGAAAC CGCCAAGACG
GCGCTGACCC GGGTGCTGAA GCAAGCCGCC GAGACGCGCT ATGCCGTCCG CGAAGGCAAG
TCCCTGCAGG TGACAGCCTC TATAGGCATG CGCAGCGTCG ACCCCCGCAG CGAACCGGAG
GTGTCAGCCC GCGAACTGCT TGCCGAGGCG GATGAGGCGG CCTACCACGC CAAGGCGATC
GGCCGGGCAG CGCTCGTCGC CTCGGATCCG GACGGCCTCA GGGTGGTGCA CCGGCTGGGG
CAGCCATCGG TGATGGGCCG ACTGGGCCAG ACGCTGGTCA GCGCCTTCAG GCGGCGCTAG
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| Protein sequence | MDPDLKRRLK ATPALPSLPP AAVRILDIAR SNEPQPRELY EAIQLDPALS ARLLRASNSP
AFRRVGEVRS LREAQMVLGY DATLTLSLSF CLFTTIRRLE AGRLDYEHFW RRSACVASVA
ALIAKSRGLA GAEAMLAGLL KDIGVLVLDS ITPADHPGWT SDEQAAAQLA AEVGAWLINE
WRLPDYLASV SWATRDLDRR LPHIPDEDQA LVEVVGVADE LVGIWLADDT GGQLDNSRDL
VARRWAWSPE QLYQLITEAD EAIKGNLALL DLSQFDEQIM VGVMDQAREV LLFQNLSQFK
TTHEANSQAD ALRERARQLE ESSLRDELTG VWNRRKLFSF LEVTLEDART AGTPVTVAFA
DLDRFKPVND DYGHAAGDVV LNHFAQKLSR LVRGDDLVAR YGGEEFAIVM PNTGGETAKT
ALTRVLKQAA ETRYAVREGK SLQVTASIGM RSVDPRSEPE VSARELLAEA DEAAYHAKAI
GRAALVASDP DGLRVVHRLG QPSVMGRLGQ TLVSAFRRR
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