Gene Mlg_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1052 
Symbol 
ID4270525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1224961 
End bp1226001 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID638125804 
Productdiguanylate cyclase 
Protein accessionYP_741895 
Protein GI114320212 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.169813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGG CAGACCGGAA TCAACTGAAC GAGGCGGTAA ACCAAGCCTT TTTGCGCTAT 
CTGGACACCT GGCTGAGGAA GCGTGATGCC GCTGCGTTGC ATGACCTCAA CGGGCCGCTG
GTGCATGGCT TCGGGACCGG TGCCAACGAG TCGGTCTATG ACCCGGACGA GGCCCGCGAG
GTCATTGAAC GGGATATCAG CCAGGTGCCT GAGCCGTTTG AGTACGCCGT TCGTACGGCC
AAGGTGACGC CGCTGTGCAC GGACGTGGCG CTGGTGGCGG CGGATATCGG GATTCGCAAC
ACTATCCTGG CGCAAGGGCA GGAGCTGGCC CTGGACCATC TGCGCCTTAC CCTGGTCTTC
CGATACATTG ACGGGGCCTG GCGACTGGAG CACCTGCACG GCTCCTTTCC CGCCACCGAG
CCTGATGGAG AAGAGGCCTG GCCGTTGCAA GCGCTTGAGG ACCGTGCGGC GGTGCTTCAG
CGCAAGGTGT GGGAGCGTTA TCGCGCGCAG GAGGCAGCCC GGCAATGCGA GGAGGGGCAG
GCCAGCACCG ATGCGCTTAC CGGCCTTCCC AATCGCGAGA GGATGGATGA GCTGCTGCAC
CGGGAGGTGG CGGGCCTGAA CGGGCAGTCC GGGGCCCTGG CGGTGATCCT GATTGACATC
GACCATCTCA ATCTGGTCAA CGAGGGCCTT GGCCAGGAAG CGGGCGATCG GGTGTTGGCC
GACGTCGCCA ATATCTTGCG CGATCGGATT CGCGTCACCG ATGCGTTGGC GCGGTGGGGC
GGGGGGGCAT TCCTGTTGGC CTGCCCGATG ACGGACGGCC TGGAGGCCGA ATACCTGGCG
CGGGCCCTGC GACGGGCCGT GGCGGAGACG GATTTCGGGT TGGGTTTCCC GTTGACGGCG
AGTTTTGGGG TTACCGCCCT GCAAGCGGGG GATACCGTGC CGGGGCTGAT TCGGCGGGCT
GAGCGTGGCC TGCGCCAGGC CAAAGAGGCG GGGCGGGATA CGGTGCAGGT GGTTTGTCGG
GAGGAGATCG TGCCGGGCTA G
 
Protein sequence
MEQADRNQLN EAVNQAFLRY LDTWLRKRDA AALHDLNGPL VHGFGTGANE SVYDPDEARE 
VIERDISQVP EPFEYAVRTA KVTPLCTDVA LVAADIGIRN TILAQGQELA LDHLRLTLVF
RYIDGAWRLE HLHGSFPATE PDGEEAWPLQ ALEDRAAVLQ RKVWERYRAQ EAARQCEEGQ
ASTDALTGLP NRERMDELLH REVAGLNGQS GALAVILIDI DHLNLVNEGL GQEAGDRVLA
DVANILRDRI RVTDALARWG GGAFLLACPM TDGLEAEYLA RALRRAVAET DFGLGFPLTA
SFGVTALQAG DTVPGLIRRA ERGLRQAKEA GRDTVQVVCR EEIVPG