| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1028 |
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| Symbol | |
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| ID | 4269769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1173506 |
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| End bp | 1175434 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638125780 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_741871 |
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| Protein GI | 114320188 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.833434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATC GCCGCATTTA TCAGGCCTGG GAGAGCTTCC TCAGTCAGGG GGAAACGCCG
ACAGGGGTGC GTGACGAAGT CCTCGCCTCC TGGCAGCGCT CCCTGGACAA CAACGTACCG
GTGGACCGCT CCCAGACCCA AGCGCTCAGC GATGGCGAGT TCCTGCGCGT CCGGCAGCAA
AGCGGCCCCT TCCTGACGGC GGCACGCCCG GCACTGGAAC AGGGGCGCCG GTTTCTCAGC
GAGGCCCGGG CCATGGTCAT GTTGAGCAAC GCCCATGGCA CCGTCCTGGA GACCGTCGGC
GACCGGCGGG TGATCGAACA TGGCCAGGAC ATCGGCCTGT GCCGGGGCGG GTTGTGGGAC
GAGGGCCACA TCGGCACGAA CGCCATCGGC ACCGCGCTGG CCAGCCAGCA ACCGGTCCAG
ATCCATGGCT ACGAACACTA TTGCTGCCGG GTACAGCGCT GGACTTGCGC CGCCGCGCCG
GTGTTCAGCC CAACGACCCG GCGCATTCTC GGTGTCGTGG ACCTCTCCGG ACCCGCGGAG
AGCTTTAACC CACAAAGCCT GGCCTACGTG GTGGCAGTGG CCCGCCAGAT TGAGGGTGGG
CTGATACAGG CCACCGAGGC CGACCACCGG CGGCTGATAG ACCGGTTTCT GGGGATGGGA
CGGCGCTGGA AGCACCGCGA CGTCCTGGTG GTCAGTCGCA GCGGCGTCAT CGTGCATGGC
AACGAACAGG TGCGACGCCA GATCAGCCGC GCCTCCCGTA ACCTGTTTTT CGAGAACACC
ATCCCGCTAC TGCGGGACAC CCCTGCGGAA GAATGGCTGG ACAAGCTCCA CGCCCAGCTG
CCCACCGCGG ACATTGAACC GGTGACCGTG GATGGCGAGC ACCTGGGGGT TATCCTGGCA
CCGCGTCAGG GTCGGACCGG CATCCGGCCG CGTAATCGGG ACATGGGCGA GCACCCGTCG
GACGGCTTCT CGCTGGACAC CCTGATCGGG GACAGCCCGG CCATGCGCGC CGCCTGCGAT
AAGGCCCGCC GACTCGCGGC CACCGACGCC CCGATCCTGA TCGAGGGCGA GACCGGGGTC
GGCAAAGAGC TCTTCGCACA GGGCATCCAC GCCCTGAGCA TGCTGACCGG GCCCTTTATC
CCGGTCAATT GCGGGGCGCT TCCCAAGGAC CTGATCGGCG GCGAAATGTT TGGTTACGTG
GGCGGGGCCT TCACCGGCGC CAGTCAGGAG GGCCGGCCCG GAAAACTGGA GGCCGCCGAC
GGCGGCACCC TTTGCCTGGA CGAGGTCAGC GAGATGCCGC TGGACCTGCA ACCCACCCTG
TTGCGCATCC TGGAGGATGG GGTCGTCTAT CGCATCGGCA GCCACCAGCC CCGACGGGTC
CGGGCCCGGC TGCTGTCCAT GACCAACCGC AATCTGCCGG AGGAGATCGA GTCCGGACGC
TTCCGTCAGG ATCTTTTCTA CCGGATCGCC GCCCTGCGCC TGCGCATCCC CCCGCTGCGG
GAACGCGGAG ACGATATCGC CCTGCTGGCG GAGTACTACC TGCGGCAACA GGCCACCCGC
AGTGGGCGAA CGCCCCAGTC ACTGTCCGCG GAGGCCATGG ACGCCCTGCT GCGCTACCAC
TGGCCCGGGA ATGTGCGCCA ACTGCGCAAT GCTATCACCA CCACTGCCGC TCTGACTGAC
GCCGCCACGA TCGACGTGGA GGCGTTGCCG GAAGAGATCC TCACCCCCGC CCCAGCCCCC
ACGCCCGGCG AGGACGGCAA TCTGCAACTA GCCACGGTGG AGCGGGCCGC CATCGAGCAG
GCCCTGCGCC GGTGTGAGGG CAATGTCTCC CGGGCTGCCC GGCAATTGGG CATCGCCCGC
TCCACGCTCT ACTGCCGCAT CCAGGAACAG CACATCCCCA TCCCCCGGCG CCGACGCACA
GCGCCGTGA
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| Protein sequence | MQDRRIYQAW ESFLSQGETP TGVRDEVLAS WQRSLDNNVP VDRSQTQALS DGEFLRVRQQ
SGPFLTAARP ALEQGRRFLS EARAMVMLSN AHGTVLETVG DRRVIEHGQD IGLCRGGLWD
EGHIGTNAIG TALASQQPVQ IHGYEHYCCR VQRWTCAAAP VFSPTTRRIL GVVDLSGPAE
SFNPQSLAYV VAVARQIEGG LIQATEADHR RLIDRFLGMG RRWKHRDVLV VSRSGVIVHG
NEQVRRQISR ASRNLFFENT IPLLRDTPAE EWLDKLHAQL PTADIEPVTV DGEHLGVILA
PRQGRTGIRP RNRDMGEHPS DGFSLDTLIG DSPAMRAACD KARRLAATDA PILIEGETGV
GKELFAQGIH ALSMLTGPFI PVNCGALPKD LIGGEMFGYV GGAFTGASQE GRPGKLEAAD
GGTLCLDEVS EMPLDLQPTL LRILEDGVVY RIGSHQPRRV RARLLSMTNR NLPEEIESGR
FRQDLFYRIA ALRLRIPPLR ERGDDIALLA EYYLRQQATR SGRTPQSLSA EAMDALLRYH
WPGNVRQLRN AITTTAALTD AATIDVEALP EEILTPAPAP TPGEDGNLQL ATVERAAIEQ
ALRRCEGNVS RAARQLGIAR STLYCRIQEQ HIPIPRRRRT AP
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