| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1023 |
|---|
| Symbol | |
|---|
| ID | 4270053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1164448 |
|---|
| End bp | 1166115 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638125775 |
|---|
| Product | NADH/ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_741866 |
|---|
| Protein GI | 114320183 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.057602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTGA TTCTGGTCCT GCTCTGGCCG CTGCTGCTGG CCGCCGCTCT GTTCACGGCG
TGGCGGCCGA GCGCGTGGCG GTGGGCCCCA TCGGCGCCGG TGCCGGCACT GCTGGCCGCC
TTCTGGCCCG GCGGCCACTG GGAGGCCCCG TGGTTGTTGC TGGGCCTGCG CCTGGGGGTG
GACCCGCTCG GCGCGCCGTT GCTGCTGCTG GCCGCGGTAG TGTGGCTGCT GGCCGCTCTC
GCCGCGCGCC GCGCCATGGC CGGAGATGCC CATCGGGACC GCTTTCTGGC GCTGTTCCTG
CTCACCATGG CCGGTAACCT GGGGGTGTTC ATCGCCCTGG ACGCGGCAGG CTTTTACCTG
GCCTATGCGT TGATGACCTT CGCCGCCTAC GGCTTGGTGA TCCACGACGG CCGGGCGGTC
TCGCGCCGGG CCGGGCGGGT CTATCTGGTG TTGGCGGTGC TGGGTGAGGG GCTGCTGGTG
GCGGGCCTGC TGCTGATGGC CGCTGAGTTC GGCAACCCCG ATCTGCGCGG GCTGGGCCCG
ATGCTGGCCG GGGCCGCCCA CAAGGACTGG CTGGTGGTGC TGTTCCTGCT CGGCTTCGGG
ATCAAGATGG GTATGGTGCC GTTGCACCTC TGGCTGCCGT TGGCCCATCC CTGCGCGCCG
GTCCCTGCCA GCGCCGTGCT CTCCGGGGTG ATCGTCAAGG CCGGGCTGAT GGGTTGGCTG
CGGTTTCTGC CGCTTGGCCA GGGGGTGACC GACGCCGTCG CCCCGTGGGT GATGGCCATC
GGCCTGTTTT CGGCCTTTTT CGCCGTGGTG GTGGGTCTGG CCCAGGAACG GGCCAAGACC
GTGCTGGCCT ATTCCACGGT CAGCCAGATG GGGCTGCTCA CCCTGCTGAT CGGTTTGGGA
TTGGCGCTGC CGGAGATCCA GTGGACCCTG GCCATGGGGG CGGTCGTGCT GATGGCGTTG
CACCATGGAC TGGCCAAGGG GGCGCTGTTC CTGGCCATGG GGGCGGACGC GCGGGCGCGG
TTCTGGCTGA TGCTTTGGCC GGCCGCCGCC CTGGCCGGAC TGCCGTTGAC CGCCGGGGCC
CTGGGCAAGA AGGCGCTCAA GGATGCCGTC GATATGGCGC CCGGGGTCTG GGCGGAGCTG
TTGCTGCCGC TGCTGGCGCT GAGCTCGCTG GCCACGACGC TGCTCATGCT GCGCCTGCTC
TGGCTGGTCC GACCGCCGGG TGGTCCCTGG GGGGCGGAGC ACAACGGCGC CGTGGGCGAG
CCGGCGCGCG GCCGGGCCCC GGTGCTTGGC CTGGTACTGA TCGGGGTGTT TCTGCCCTGG
TTGTGGGCGG GGTGGCAGCT TCCCCAGGCG GCGGTGGCGG CCCTCGGGGT GACGGCACTC
TGGGACAGCC TCTGGCCGGC ACTGCTGGGG CTGGGGGCGG GGGGCGCCTG GTGGTATTGG
GCGCCGCGCC GCTGGCAGGC CGTGCGCTTG CCGGAAGGGG ACCTGGCCGC CCTGTTGCCC
GCCGCGCCTT CGTTGCCCCA GCCGCCCGCC TGGCAACCGT TACTATCGGA CAGCGGTGGC
GGCAGCCGGC TGGTGTCCCG GATGGCGTCC GGGTTCAGTC AATTGGCGGT GGCCGGGGCG
CTGTTCCTGG CCCTGGTGCT CCTGATGCTG CTGCTCCTGC TGCGCTGA
|
|---|
| Protein sequence | MLVILVLLWP LLLAAALFTA WRPSAWRWAP SAPVPALLAA FWPGGHWEAP WLLLGLRLGV
DPLGAPLLLL AAVVWLLAAL AARRAMAGDA HRDRFLALFL LTMAGNLGVF IALDAAGFYL
AYALMTFAAY GLVIHDGRAV SRRAGRVYLV LAVLGEGLLV AGLLLMAAEF GNPDLRGLGP
MLAGAAHKDW LVVLFLLGFG IKMGMVPLHL WLPLAHPCAP VPASAVLSGV IVKAGLMGWL
RFLPLGQGVT DAVAPWVMAI GLFSAFFAVV VGLAQERAKT VLAYSTVSQM GLLTLLIGLG
LALPEIQWTL AMGAVVLMAL HHGLAKGALF LAMGADARAR FWLMLWPAAA LAGLPLTAGA
LGKKALKDAV DMAPGVWAEL LLPLLALSSL ATTLLMLRLL WLVRPPGGPW GAEHNGAVGE
PARGRAPVLG LVLIGVFLPW LWAGWQLPQA AVAALGVTAL WDSLWPALLG LGAGGAWWYW
APRRWQAVRL PEGDLAALLP AAPSLPQPPA WQPLLSDSGG GSRLVSRMAS GFSQLAVAGA
LFLALVLLML LLLLR
|
|---|
| |