| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1009 |
|---|
| Symbol | |
|---|
| ID | 4268377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1149199 |
|---|
| End bp | 1149927 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638125760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_741852 |
|---|
| Protein GI | 114320169 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.815562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTCGG ACAGGCGCAG TCGAAGGGTG AGTATTGGGG TGCTCCTGCT CTGGGCCCCG
ATGGCCCTGC TGGCAGAGGA ACTGGTGCTT ACCACCGAAG ACTACCCCCC CTACAATTTC
CAGGATGAGG ACGGGGGGTT ATCCGGTATC TCCACCGATG TGTTGCGGGA GGCGTTGGAG
CGGGCCGAGA TTGAGGCCTC TTTCCGCCTT CTGCCCTGGG CCCGGGCCTA TGCGGCGGCA
CAACAGCGGC CCGGCGCCTG TGTCTATTCC ACCGGCCGTA CGCCTGAGCG CGAGCCGCTG
TTCGAATGGG TTGGCCCGCT CTCCGACAAC GACTGGGCGG CCTTCAGCCA TCCCGATGCC
GACGTGGAGG CCGAGTCCGT CGGCGATCTG CACATGCTGC GGGTGGGAGG GTTCCGTGGC
GATGCCACCT CCGCCTACCT GGAGTCACGA GGGGTGGATA TCGATTATGT CAGTCACGAT
GCCCTGAACG CCCGCCGCCT GCAGGCCGGC CGGATTGATG TCTGGGTCAC CGGCAGCCGG
GTGGCCCCCT GGCTCGCACG CCGGGAAGGC ACCGGCCCGG TGGAACAGCG GTTCGTCTTC
CGGGAGGTGG ACCTTTACCT GGCCTGCCAT CCCGACACCG ATCCCGATAC CCTGGCGCGT
CTGCGGTCGG CACTGCAGGC CATGGAGGCC GACGGGGCGA CCGAGGAGAT CCGCGACCAT
TACCGTTGA
|
|---|
| Protein sequence | MVSDRRSRRV SIGVLLLWAP MALLAEELVL TTEDYPPYNF QDEDGGLSGI STDVLREALE
RAEIEASFRL LPWARAYAAA QQRPGACVYS TGRTPEREPL FEWVGPLSDN DWAAFSHPDA
DVEAESVGDL HMLRVGGFRG DATSAYLESR GVDIDYVSHD ALNARRLQAG RIDVWVTGSR
VAPWLARREG TGPVEQRFVF REVDLYLACH PDTDPDTLAR LRSALQAMEA DGATEEIRDH
YR
|
|---|
| |