| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1002 |
|---|
| Symbol | |
|---|
| ID | 4268370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 1136771 |
|---|
| End bp | 1138354 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638125753 |
|---|
| Product | respiratory nitrate reductase beta subunit |
|---|
| Protein accession | YP_741845 |
|---|
| Protein GI | 114320162 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1140] Nitrate reductase beta subunit |
|---|
| TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.33657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTCC GGGCGCAAAT CGGAAAAGTC CTGAATCTGG ACAAGTGCAT CGGGTGCCAC
ACCTGCTCGA TCACCTGCAA GAACGTATGG ACCTCCCGCG AGGGCATGGA GTACGTGTGG
TTCAACAATG TGGAGTCCAA GCCCGGCGTC GGCTACCCCA AGGACTGGGA GAACCAGGAC
CGCTGGAACG GTGGCTGGGC GGTGCGTAAC GGCCGCCTGG AGCCCCGGGC CGGGGGCAAG
TGGCGGATTC TGTCCAACAT CTTCTACAAC CCGGACCTGC CGTCCATCGA CGATTACTAC
GAGCCGTTCA ACTTCGACTA CCAGCGGCTG CAGAACGCCC CGGCGTCGAA GTATCAGCCC
GTGGCCAAAC CCTTCTCGGC GCTCACCGGC TACCCGATGG ACAAGATCGA GTGGGGCCCC
AACTGGGAGG AGATCCTCGG CGGCGAGTTC GAGAAGCGGT CCAAGGACTA CAACTTCGCC
AAGGTGCAGA AGGAGATCTA CGGCCAGTTC GAGAACACCT TCCTGATGTA CCTGCCGCGG
TTGTGCGAGC ACTGCCTCAA CCCCTCCTGC GTGGCCTCCT GCCCCTCGGG CGCGATCTAC
AAGCGCGAGG AGGACGGCAT CGTCCTGATC GACCAGGACA AGTGCCGGGG CTGGCGGATG
TGCATCAGCG GCTGCCCGTA CAAGAAGATC TACTACAACT GGCAGAGCGG TAAATCGGAA
AAGTGCACCT TCTGCTTCCC CCGTATCGAG GTGGGCCAGC CCACGGTCTG TTCGGAGACC
TGCGTGGGGC GCATCCGTTA TCTGGGCGTC ATCCTCTACG ACGCCGACAA GATCTCGGAG
GCCGCCTCCA CCGCCTCGGA ACAGGACCTG TACGAGAAGC AGATGTCGGT CTTCCTCGAC
CCCCATGACC CGGAGGTCAT CGCCGAGGCC AAGAAGGCGG GCATCCCGCA CGCCTGGCTG
GAGGCCGCGA AACGCTCGCC GGTCTACAAG ATGGCCATGG ATTGGAAGGT CGCCTTCCCG
CTGCACCCGG AGTACCGCAC GCTGCCGATG GTCTGGTACA TCCCGCCGCT CTCCCCCATC
CAGTCCGCCG CCGATGCGGG CACCCTCGAG AACGACGGAC TGATTCCGGA TGTGAACTCG
CTGCGCATTC CGGTCAAGTA CCTGGCCAAC ATGCTGACCG CCGGCGATGA ACGTCCGGTG
GTGACGGCCC TGCAGCGAAT GCTGGCCATG CGCCACTTTA AACGCAGCCA GACCGTGGAG
GGCAAGCCCA ACCACCAGGT CCTCGAACAG GTCGGCCTGG ACGAGGCCAC GGTGGAGGAC
ATGTACCAGA TCATGGCCAT TGCCAACTAC GAGGATCGGT TCGACGTCCC GGCCGCCAAC
CGGGAACTGG CCGCCGACGA TGCCTACGGC GAGCGCTCCG GCTGCGGCTT CAGCTTCGGC
GACGGCTGCA ACGCCGCCAG CAACGGTGTC AGCCCGCAGG ACATCTTCGG TGGCCGCCGG
GCCTCCCGCC GGGCCTACCC CGTCCGCGAG GAGCCATCGG CGCCGGCCGA GGAAGCCGAG
AAGCAGAAGG AGGGCACGTC ATGA
|
|---|
| Protein sequence | MRVRAQIGKV LNLDKCIGCH TCSITCKNVW TSREGMEYVW FNNVESKPGV GYPKDWENQD
RWNGGWAVRN GRLEPRAGGK WRILSNIFYN PDLPSIDDYY EPFNFDYQRL QNAPASKYQP
VAKPFSALTG YPMDKIEWGP NWEEILGGEF EKRSKDYNFA KVQKEIYGQF ENTFLMYLPR
LCEHCLNPSC VASCPSGAIY KREEDGIVLI DQDKCRGWRM CISGCPYKKI YYNWQSGKSE
KCTFCFPRIE VGQPTVCSET CVGRIRYLGV ILYDADKISE AASTASEQDL YEKQMSVFLD
PHDPEVIAEA KKAGIPHAWL EAAKRSPVYK MAMDWKVAFP LHPEYRTLPM VWYIPPLSPI
QSAADAGTLE NDGLIPDVNS LRIPVKYLAN MLTAGDERPV VTALQRMLAM RHFKRSQTVE
GKPNHQVLEQ VGLDEATVED MYQIMAIANY EDRFDVPAAN RELAADDAYG ERSGCGFSFG
DGCNAASNGV SPQDIFGGRR ASRRAYPVRE EPSAPAEEAE KQKEGTS
|
|---|
| |