Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0985 |
Symbol | |
ID | 4269336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 1121981 |
End bp | 1122709 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638125736 |
Product | RNA polymerase, sigma 28 subunit |
Protein accession | YP_741828 |
Protein GI | 114320145 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.337517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAC ATGCCATGTA CGCCGAGGTG GCGGCTCAGC ACGACAACGA TCTGCTGGTG CAGCACGCCT CGCTGGTCAA ACGCATCGCT CACCACTTGG CCGGCCGTTT GCCGCCCAGT GTGCAATTGG ACGATTTGAT CCAGGCCGGC ATGGTGGGCC TGCTGGAGGC GGCGCGGCAG TTCGACCCCG GTCAGGGGGC CAGCTTTCAG ACCTACGCCG GTATCCGGAT CCGCGGCGCG ATGCTGGACG AGATCCGGCG GCTGGACTGG ACCCCGCGCT CGGTACACCG CAAGGGCCGC TCGGTGGCCG AGGCCATCCG GGCCGTGGAG CATCGGACCG GGCGAGATGC CCGCGACCAC GAGGTGGCCC AGGAGCTGGG CATCACCCTC GATGAGTACC ACCAGATCCT GCAGGATGTC TCCACATCCC GCATCTTCAG CATCGACCAG GAGGATCCGG CCACCGGCGA GCCCCATCAG TTGCCCGGGG ATCATCCGGA GCCGTTCGCC GAGATCACGG ACGAGGGCTT CCAGAGGGCA CTGGCCGAGG CCATCCGCCG GCTGCCCGAA CGGGAGCAGC TCATCATGGC CCTGTACTAC GACGAGGAAC TCAACCTGCG CGAGATCGGC GAGGTGTTGA ATGTCACCGA GTCACGCGTC AGCCAGATCC ACGGTCGGAT TGTGGTCAAG CTGCGAGAGG CGTTAAAGGA ATGGCTCGGC CGGAGCTGA
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Protein sequence | MNGHAMYAEV AAQHDNDLLV QHASLVKRIA HHLAGRLPPS VQLDDLIQAG MVGLLEAARQ FDPGQGASFQ TYAGIRIRGA MLDEIRRLDW TPRSVHRKGR SVAEAIRAVE HRTGRDARDH EVAQELGITL DEYHQILQDV STSRIFSIDQ EDPATGEPHQ LPGDHPEPFA EITDEGFQRA LAEAIRRLPE REQLIMALYY DEELNLREIG EVLNVTESRV SQIHGRIVVK LREALKEWLG RS
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