| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0952 |
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| Symbol | |
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| ID | 4269686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1082248 |
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| End bp | 1083405 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638125703 |
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| Product | CRISPR-associated Cse4 family protein |
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| Protein accession | YP_741795 |
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| Protein GI | 114320112 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.195706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCCTGC AAATCCACAC CCTCACATCT TACCATGCCG CCCTACTTAA CCGGGACGAT
GCCGGCCTTG CCAAGCGCAT TCCCTTTGGC AGTGCAGAAC GTATGCGGGT CTCCTCCCAA
TGCCTAAAGC GCCACTGGCG GCAGGCCCTG AAAGACGTAA TTTCCCTCCC GAGCGGAATC
CGCACCCGCC ATTTCTTCGA ACGAGAGGTC TGCCGACGTG TTATCGCCGA GGGCGTCGAA
GACGAGAAGG CGCGTGAATT AACAGGCAAG CTCATCGACG CCGTTATGCA CAGCAAAGAG
GCCCGCGAGA AAGACTCCCT TTTCCTCAAA CAACCTGTCC TTTTCGGCCG ACCAGAGGCT
GACTACTTCG TCAGTTTGAT CACCGAATGT GCCCGTAGCG GTGAAGATCC CGGCTCAACC
CTCAAGGATC GGGTCAAGGC GGAGAAAAAG AACTTCCGCG CCCTGCTTCA GGCGGCTGGA
GGCAGTGACC TTGAGTCGGG CATAGAGGGC GCCCTGTTCG GGCGTTTCGT CACGTCAGAC
ATCCTTGCCC GCACTGATGC CAGTGTCCAC GTCGCCCATG CCTTTACCGT GCATTCCCTG
AACAATGAGG TGGACTATTT CACTGTGGTA GACGACCTGA AGGAGCCAGG CGAGGATGCC
GGCGCAGCAC ATGCCGGGGA TATGGAACTG GGCGCTGGGC TTTTCTACGG GTACGTCGTG
GTGGACGTAC CACTGCTCGT CTCAAACCTT TCCGGTTGTG AGCGGCAGGC ATGGCGCGAA
CAGACAGAGG CTTGTGCCGA CGCCCGTGAT GTCTTGGCGG CCCTGGTACA CAGCATCGCA
ACCGTCTCGC CCGGAGCCAA ATTGGGTGCT ACGGCTCCCT ACGCCCGTAC CGACTGTGCG
TTGTTGGAGA CCGGTACGAC CCAGCCCCGT GCCTTGGCAA ACGCTTACCT TGAACCCCTG
CCAGCGCGGG GCGACCTGAT GCAGCAGTCC GTTAATACCA TGGGCCATTA CCTGAAATCC
CTTGATGACA TGTTCGGTGA GGAAACCAGT CGCTTCGTCT CTGCTACCAG GGACACAACG
TCGCTCCCCT GCGCCCACCG CGGCCCCCTT TCAGAAACGA TCGACGGCGC CTTGGATAGC
ATCTTCGGAG GTCAATGA
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| Protein sequence | MFLQIHTLTS YHAALLNRDD AGLAKRIPFG SAERMRVSSQ CLKRHWRQAL KDVISLPSGI
RTRHFFEREV CRRVIAEGVE DEKARELTGK LIDAVMHSKE AREKDSLFLK QPVLFGRPEA
DYFVSLITEC ARSGEDPGST LKDRVKAEKK NFRALLQAAG GSDLESGIEG ALFGRFVTSD
ILARTDASVH VAHAFTVHSL NNEVDYFTVV DDLKEPGEDA GAAHAGDMEL GAGLFYGYVV
VDVPLLVSNL SGCERQAWRE QTEACADARD VLAALVHSIA TVSPGAKLGA TAPYARTDCA
LLETGTTQPR ALANAYLEPL PARGDLMQQS VNTMGHYLKS LDDMFGEETS RFVSATRDTT
SLPCAHRGPL SETIDGALDS IFGGQ
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