| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0925 |
|---|
| Symbol | |
|---|
| ID | 4268212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1049995 |
|---|
| End bp | 1051164 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638125677 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_741769 |
|---|
| Protein GI | 114320086 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGGA TCCTCACCTT TAACAACATC TCGGTCAAAG GGCTGGAGCG CTTCCCGCGG
GATCACTTCG AGACCTCCTC CGACATCGCC CACCCGGACG CCATCATGCT GCGCTCCCAC
AAGCTACAGG AGAGCGAGGT GGCGGATACC GTGTTGGCGG TGGGCCGTGC CGGCGCCGGG
GTCAACAACA TCCCGGTGGA GGCCATGAGC CGGCGGGGCG TCCCGGTGTT CAACGCCCCG
GGCGCCAACG CCAACGCAGT GAAGGAGTTG ACCATCGCCG GGCTGTTCCT GGCCGCCCGC
AACATCTGCC AGGCCTGGGA CTTTGCCCGC GCCCTGGAGG GGAGCGACCA GCAGATCAAC
GCCGAGGTGG AGGCGGGCAA AAAGCGCTTC ACCGGCTTTG AGCTGCCGGG GCGCACCCTG
GGCGTGATCG GCCTGGGTGC CATCGGGGTG GAGGTGGCCA ACGCGGCTAT GGCCCTGGGC
ATGAAGGTTG TCGGCTACGA CCCGCAGATC ACCGTGCACC GGGCCTGGCA GCTCTCCAGT
CAGGTGGAAC AGGCCCATAG CGTCGATGAA CTGATGAGCC GGGCCGATGT GGTGACCATT
CACGCCCCGC TGAATGAGGC CACCCGTGGG CTGATCAATG GTAGCCGCCT GGCCGCGGCC
CACCCGGGGC TGACGGTGCT CAACTTCGCG CGTTCCGAGG TGGTGGACGA GCAGGCCATC
CTGGAGGCGT TGGACCGCGA CCATCTGCGT GCCTATATCT GTGACTTCCC CAGCAATGCC
CTGAAGGGGC GGGGCAACGT CATCGCCTTG CCCCACCTGG GTGCCTCCAC GGTGGAGTCG
CAGGAGAACT GCGCCGTCAT GGTGGCGGAT CAGCTCCGCG AGTACCTGGA GACGGGCAAT
ATCCGCAACG CGGTCAACTT CCCCGAGGTG GTGATGCCGC GGGGGGGCAA GGGCAACCGG
CTCTGCGTGG TGAATGCCAA CGTGCCCAAC ATGCTGGGGC GGATCTCCAC CGCGCTGGCG
GAGGCGGGGT TGAACATTGA CGATATGTAC AACAAGTCTC ACGAGGAGCT GGCCTACACC
GTGGTGGACG TGGAGGGCGC CATCCCCGAG TCGGTAGTGC AGGCCATTGC CGAGGTGGAG
GGCGTGTTGC GGGTTCGGGT CATCGAGTGA
|
|---|
| Protein sequence | MFRILTFNNI SVKGLERFPR DHFETSSDIA HPDAIMLRSH KLQESEVADT VLAVGRAGAG
VNNIPVEAMS RRGVPVFNAP GANANAVKEL TIAGLFLAAR NICQAWDFAR ALEGSDQQIN
AEVEAGKKRF TGFELPGRTL GVIGLGAIGV EVANAAMALG MKVVGYDPQI TVHRAWQLSS
QVEQAHSVDE LMSRADVVTI HAPLNEATRG LINGSRLAAA HPGLTVLNFA RSEVVDEQAI
LEALDRDHLR AYICDFPSNA LKGRGNVIAL PHLGASTVES QENCAVMVAD QLREYLETGN
IRNAVNFPEV VMPRGGKGNR LCVVNANVPN MLGRISTALA EAGLNIDDMY NKSHEELAYT
VVDVEGAIPE SVVQAIAEVE GVLRVRVIE
|
|---|
| |