| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0918 |
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| Symbol | |
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| ID | 4269303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1037790 |
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| End bp | 1039838 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638125670 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_741762 |
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| Protein GI | 114320079 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.866544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC GCGAGAACGC CAGCGGGGGG CGCACCACGC CCGATCTGGA GCCCCGGCGC
AGCCGCTCCC GGCTGCACTT GGCCTGTCAC ATCGTCGCCC AGTGCCTGTT CTACGCCCTG
GCGCTCTATT TCTTCAGCCA CCTCAGCATC TATTACTTCA CCGGCGCCGG CGGGGCCACG
CTCCTGGCGG TGACGCTGGT CCCCATCGCC GTCGCCATTG CCTTCGCCAA TGACCTGCGC
CACGACGATC TCTACCCCCT GCTCGGTCCG CTACCTGCGA CCCTGATCGG CATCGCGTAC
GCTGCCGCGC TGATCTATGC GGCCTACTAC CTGGTCACCG AGTTCGAGAA TATCCGCATC
TACCGGGTGG GGTTCTGGAA CGACGCCGAC AAGGCGGCCG GCGCCATCGT GGTGGCGCTG
ACCCTGGAGT ACACCCGGCG GCGCTACCTG GCCCTGGCCC TCGTGATCCT GCTGCTGATT
CTGTACACCG CCTACGGCCA CCTGGTGCCC GGCATGTTCC AGCACCCGGG GATGAGCTGG
AACCGCATTC TCACCGCCAC CAGTTTGGAG ATCTCCACCG GGGTGTTCGA GCGCCTGCCC
CAGTTGGGGC TGACCCTGAT CGGCTCCTTC ATGCTGGTGC TGGCCGTGCT GCGCGCCTTC
GGTTGTATCG ACTCCATACT GGCCGGCAGC TCCCGGCTGG CCGCCCGATC ACCCCGACTG
TTGCCCCAGG CCGCGGTGAT CGGCAGCTTT TCCGTGGCCG CCGTCTCCGG CAGCGGCGCG
GCCAACGCCG CGACCACCGG CTCGGCCACC ATCCCGGTGT TGATCCGGGC CGGCTTTCCG
CGGGTCAAGG CCGCCGCCAT CGAGACCGCC TCGTCGCTCG GCGGGCAGTT GATGCCGCCG
TTGATGGGCA TCGCCGCCTT CCTGATGGCC GAGTACCTGC GGGTCAGCTA TTTCGATGTG
GTCGCCCGCG GTTTCGCCCC CGCGATCCTC TATTTCCTGG GCGTCAGTGT CGCGGTTTAC
CTGCTGGCCG GCCGCTACAT GCAGCGCGCG GTCACCCCGC GCCGGGAACC GATTGATTAT
GTGGACATCA TCAACCTGTC CGCTTACGCC CTGGCGGTGA TCGGCCTGAT CTGGCTGATG
GGGGTGGAGC GGCGGGCGGC CATGTCCTCG GCGCAGTTGG TGTTTATCGC CCTGTTCTCG
GTGCTCAGTG CGCTATTCCT GCTGCGGTTC CTCTGGGCGC TTTACCACCA GTCCGGCCCG
CGACTCACCC CGGCGCGCCT GCAAGAGGCC GGCCGCCCCT TCGTGCGCCT GATCGAGACC
TTCACCACCA ACACCGCGGA ACTGACCGTG CTGCTCGCCA CCCTGGGCAT TCTCACCGCC
ACCTTCACCA TCACCGGCGT GCCCACCAAG GTGGGCATCC TGCTGATGGA GATGGCCGGC
GCGCACCTGG CCCTGATGGT GCTGGTGGCT TTCGCCTTCG GCTACCTGGT GGGCATGGGC
CTGCCGGTGG CGCCCACCTA CATCATCGTG GCAGTGGTGA TCACCCCCTT CATGATCCGC
GCCGGGGTCG ACCCTTGGGT GGCGCACTTC TTCGCCTTCC TGGTGGCGGT GTTCGGCGAG
CTCTCCCCGC CCACCTCGGT GGTGGCGGCG GTCACCTCGC GAATCGCCGA GGCCCCCTTC
GTGCGCACCA TGATCTCGGC GCTGGGCATG TGCGTGCCGC TACTGATCCT CATGGTCGGC
GTCTACACCC GGCCGGCGCT GGTGGTAGAG CCGGGTTGGC CGCAGCTTCC CGCCTTCGCC
CTGCTGCTGG TCGGAACCCT GGGGACCATT CTCGCCCTGC AGGGCCGCTA TGCCCAGGGA
TGGCTTCGGG ACTGGGGCAC CCGCCTCGCC CTGGGGCTGC TGAGCGCGGT GGTGGTGCTG
CATCCGGACG AGCGGCTGGC GTGGGTGGTG ACCGCTCCGG TACTGGCCAT GGTCTTCTGG
GGCCTGCTGC GGGCTCACCG GGCCCTGCGG GCACGACCGC TGGAGGCGGC CGACAGCGCC
CCCGCCTGA
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| Protein sequence | MTERENASGG RTTPDLEPRR SRSRLHLACH IVAQCLFYAL ALYFFSHLSI YYFTGAGGAT
LLAVTLVPIA VAIAFANDLR HDDLYPLLGP LPATLIGIAY AAALIYAAYY LVTEFENIRI
YRVGFWNDAD KAAGAIVVAL TLEYTRRRYL ALALVILLLI LYTAYGHLVP GMFQHPGMSW
NRILTATSLE ISTGVFERLP QLGLTLIGSF MLVLAVLRAF GCIDSILAGS SRLAARSPRL
LPQAAVIGSF SVAAVSGSGA ANAATTGSAT IPVLIRAGFP RVKAAAIETA SSLGGQLMPP
LMGIAAFLMA EYLRVSYFDV VARGFAPAIL YFLGVSVAVY LLAGRYMQRA VTPRREPIDY
VDIINLSAYA LAVIGLIWLM GVERRAAMSS AQLVFIALFS VLSALFLLRF LWALYHQSGP
RLTPARLQEA GRPFVRLIET FTTNTAELTV LLATLGILTA TFTITGVPTK VGILLMEMAG
AHLALMVLVA FAFGYLVGMG LPVAPTYIIV AVVITPFMIR AGVDPWVAHF FAFLVAVFGE
LSPPTSVVAA VTSRIAEAPF VRTMISALGM CVPLLILMVG VYTRPALVVE PGWPQLPAFA
LLLVGTLGTI LALQGRYAQG WLRDWGTRLA LGLLSAVVVL HPDERLAWVV TAPVLAMVFW
GLLRAHRALR ARPLEAADSA PA
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