| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0906 |
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| Symbol | |
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| ID | 4269291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1024237 |
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| End bp | 1025091 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638125658 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_741750 |
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| Protein GI | 114320067 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0584416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGCTC TGGACTACTG CCGCAAAAAG GCCGCCCCAC CGGGGTCCAG CCTGCATTAC
GCCCTGCTGT TCGCCACCCC CGTTCAACGG GACGGGCTGC TGGCGCTGCA CGCCTTTCAC
CGCGAGGTGA CGGCCATCCC CGGTGAGGTC AGCGATCCCG CTGTGGGCCG GGCCAAGCTC
GACTGGTGGC GCGGGGAGAT CGACCGCGTC TTCGAGCGGC AACCGGAGCA CCCGGTGGGC
CACGCCCTGG TCCCGGTGAT CCGGCAGTCC GAACTGCCCC GCGAGCGCTT CGAGGACATC
ATCACCGGCA CGGCGCTGGA CCTGGAGTAT GGCGTCTATC CCAGCTTCCG CGAGCTGTCG
GCCTACGGCC ATCAAGTGGG GTGTGCCATG GCCGATCTGG CCCTGCGCCA GGCGGGGTAC
AATGACCCGG CCAGTGCCCG CTTCGGGCAC CATCTGGGGA TGGCCCTGCT GCTCACCGGC
CGACTGCGCC ACCTGGGCCG CCACGCCCGG GCCGGGCGGT TCTATCTGCC GGAGGACGAG
ATCCACGCGG CAGGCCTGTC CCGCGAGGGC CTGCTGCGAC TGCCCGCGGA CCACCCGGGG
CTGCAGCACC TGCTGCAGCA GCAGGTGGAC CGGGCGCGCG ATTTCTTCCG CCAGGCGGAT
ACCGCCCTGG CCGACCGCGA CCGCTATGCC CAGCGCCCGG CCCTGATCAT GGCCGCCCTC
TACCGGCAAC TGCTGGTGGA GCTGGAGCGC CAGGGGCTGC CCATGCTCCA TCGGCGCGTT
CACCTGACAC CGCTGCGCAA GCTGTGGCTG GCATGGCGCA CCGCGCGCAG GGAACGGCGG
CATCAAAACC AATAG
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| Protein sequence | MQALDYCRKK AAPPGSSLHY ALLFATPVQR DGLLALHAFH REVTAIPGEV SDPAVGRAKL
DWWRGEIDRV FERQPEHPVG HALVPVIRQS ELPRERFEDI ITGTALDLEY GVYPSFRELS
AYGHQVGCAM ADLALRQAGY NDPASARFGH HLGMALLLTG RLRHLGRHAR AGRFYLPEDE
IHAAGLSREG LLRLPADHPG LQHLLQQQVD RARDFFRQAD TALADRDRYA QRPALIMAAL
YRQLLVELER QGLPMLHRRV HLTPLRKLWL AWRTARRERR HQNQ
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