Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0883 |
Symbol | |
ID | 4269704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 1003917 |
End bp | 1005008 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638125635 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_741727 |
Protein GI | 114320044 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTATC CGCCACGCAC AACCGTCGCG CCCCGCCTCC CCGCGCTGCT ATTGCTGCTG GGGCTGCTCG CCGGCGTCGG CCCGAGCGAC GCCCGGGCCG ATGACAATGA CCGCGACGCC CCGCGCGCCA CCCCGGTTAT CGGGGTGGAG ATCACGCCCC GGGACCTCTC CCGCCGCGTT TCGGTGGCGG GCAACCTGGA GCCGCTCCGG CGCGTACGGG TCACCAGCCG TATCGCGGGG GCGCTCTCGG AGCTGGATGC CGAGGTGGGC GACCGCGTGG CAGAGGGGGA GTTGCTGGCC CGAATCGACG TCAGCGAGCA GCGCGCGGAG CTTGCCCGCG CGGAGGCCCG ATTGGTGGAT GCCGAGGCCC GCTATGAGCG CTACCGTCGA CTGCGGGAAC GGGACCTGGC CTCGACCGCC GAGTTCGAAG CGATGGAGGC GGAGCTGCGG GTGGCGCAGA GCGAGCGCGA GCTCTGGCGG GCCCGGGTCC GCCACGGCGA GGTGCGGGCC CCGCTGGACG GCACCGTCCT GCATCGCCCC GTGGAGGCCG GCGACGGCAT CGGTAGCGGC GATCTGCTGT TCGAACTGGC GGAGGTGGAC ACCCTGCTGG CCCGCATCGG GGTCTCGGAG CTGGACATCC AGCACCTGCA GCGGGGCCAG ACGGCCCTCC TGCGGCCCGA CGCCCTGGGC GGTGAACCCA TCGCGGGCGA GATCCGGCGC ATCCACCCCA GCGCGGATCC ATCCAGTCGG CTGGTGACCG TCGAGGTGGC GATCGACGCG GAGACCCCGG CCGGGCGCCT GCGCCCCGGC TACCTGACCC GGGTCACACT GATGGTGGAC CCGCGCCCCG GCCGCCTGGC GGTGCCCTCG CAGGCGCTCG GAGCGGCAGC GCCGGGCGAG CACTATGTCT ATGTGATCGC CAACGGGCAG TTGGAGCAGC GCGAGGTGCA GGCGGGCGTC AGTCGCCGCG GCTGGACCGA GATCCTGCAG GGCCTGGCAA CGGGCGAGGT GGTGCTGGCG GTCAATCCGC TCACCTTCAA CGAAGGTGAC CGGGTGCGGG TCATCCAATG GTATGCCGGG GACGACGGAT GA
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Protein sequence | MPYPPRTTVA PRLPALLLLL GLLAGVGPSD ARADDNDRDA PRATPVIGVE ITPRDLSRRV SVAGNLEPLR RVRVTSRIAG ALSELDAEVG DRVAEGELLA RIDVSEQRAE LARAEARLVD AEARYERYRR LRERDLASTA EFEAMEAELR VAQSERELWR ARVRHGEVRA PLDGTVLHRP VEAGDGIGSG DLLFELAEVD TLLARIGVSE LDIQHLQRGQ TALLRPDALG GEPIAGEIRR IHPSADPSSR LVTVEVAIDA ETPAGRLRPG YLTRVTLMVD PRPGRLAVPS QALGAAAPGE HYVYVIANGQ LEQREVQAGV SRRGWTEILQ GLATGEVVLA VNPLTFNEGD RVRVIQWYAG DDG
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