| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0873 |
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| Symbol | |
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| ID | 4269694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 988516 |
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| End bp | 990789 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125625 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_741717 |
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| Protein GI | 114320034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.575747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAC AACGACACGA CAATCAGAAC ACGGCACCCG ACGACAAGGA TCCCCAGGCA
CCGGACGCCC CCAAGGTGGC CGTAGAAGAT GTGACCGAAA TCCCCCTCGG TCACAATGAG
CGCGACGTGG CGGGCTGGCA ACGCTGGCTG CTCTACAGCA TCTGCGTGCT CTACACGGCC
TTCCATCTCT ATTCGCTCAA CGTTGCCCCG ATGGAGACCT GGGCCTTCCG CATCAGCCAC
GTGGCGGGGG GCCTAGTCAT CGGCTTCCTG CTGACCACCG CGGCCACCCT GAACCGCACC
GCCAATCCGC GGGCGCTGAC CACCCCGCAG TTGGTGCCCC TGCTGGCCAG CGCCACCGCC
ATCGGTTACG CGGCCTTCTG TATCGGCCTG GCCTGGTACC TGCGTGAAGT GGGTGGCCAG
CCCAACCCGC CGGACTGGGT CTTCGAACAC ATGCGCTATG CGCTGATCGG TGGCACCGGT
ATCGCCCTGC TCTCCAGTTG GATCTTTCAC AGCCCCGCCA ATCGGGTGCA CTGGCCCGAT
TGGCTGCTGT CGCTGGCCGC CATCGTGGTG GCCGCGTTCA TTATTTTCGC CCTGGCCCGC
TGGCGTATGG CCGCCGGCAC CTCCTTCGTC GGCACCACCG AGTTCCTGGT CTCGCTCACC
GGGATCCTCC TCATCCTGGA GATGACGCGC CGGGTGGCCG GGCTGGCGCT GGTCATCATC
ACCGGTGTGT TCCTGTTCTA CGCCTTCGCC GGCCCGTGGC TGCCGGGCAT CCTGGAGCAC
CGTGGTTACT CCTTCCCGCG CTTCTTCAGC TATGTCTATA CCGACAACGG CATCCTCGGA
CCGACCACGG CCGTCTCGTC CACCTACATC ATCCTGTTCA TCACCTTCGC CGCCTTCCTC
CAGGCCTCCA AGGTGGGCGA CTACTTCGTG AATTTCGCCT TCGCCGCCGC CGGCCGGGCC
CGCGGCGGGC CGGCCAAGGT CTCGATCTTC GCCTCCGGGC TGATGGGGAT GATCAACGGC
ACCTCGGCGG GGAACGTGGT GGCCACCGGC AGCCTGACCA TCCCGTTGAT GAAGAAGGTG
GGCTACCACC CGCGCAGCGC GGGGGCCATC GAGGCGGCCG CCTCCACCGG CGGACAGATC
ATGCCGCCGA TCATGGGGGC GGGTGCCTTC ATCATGGCGG AGATCACCGG CATCCCCTAT
ACCGAGCTGG CCATCGCCGC CATCATCCCG GCGGTGCTCT ACTTCCTGTC CGTCTATTTC
ATGGTGGACC TGGAGGCCCG CAAGATGGGC ATGACCGGCC TGCGCGGTGA CCAGCTACCG
CAGCTCGGCG ACATGCTGCG CAAGGTCTAC CTGTTCATCC CGATTATCGT GCTGATCGGG
GCGTTGTTCA TGGGCTACTC GGTGATCCGC GCCGGCACCG TGGCCATGAT CAGTGCCGCC
GTGGTCTCCT GGCTCACCCC GCACTGGATG GGCCCCCGGG CCATCCTCCG GGCCTTGGAG
CTGGGCGCCA AGATGGCCAT CCCGCTGGTG GCGGTCTGCG CCTGTGCCGG CATCATCGTC
GGCGTGATCA GTCTCACCGG CGTGGGCGCG CGCTTTGCCT CCATGCTGCT GGGCATCGCC
CAGGTGGATG TAACCATCCC CATCATCAAC TGGACCATCG AGGGCAGCGG CCAACTGCTG
GCGATGTTCT TCGCCATGTG CATCAGCATC CTGCTGGGCA TGGGCATGCC CACCACTGCG
GCCTACGCGG TGGCCGCCTC GGTGGTAGCA CCCGGCCTGC AACGGCTGGG GATCGACCCG
CTGGTGGCGC ACTTCTTCGT GTTCTACTTC GCGGTCATCT CCGCCATCAC CCCGCCGGTG
GCGCTGGCGG CCTACGCGGC CTCGGCCATC GCCAACACCG ATCCGCTGCG CACCTCGGTC
ACCTCCTTCA AGGTGGGCCT GGCGGCATTC ATCGTGCCCT TCATGTTCTT CTACAGCCCG
GCGCTGCTGG GCGAGGGCAC CTGGGGCGAG ATCGCCCGCG TGGTGGTCAC GGCCAGTATC
GGCATCTACC TGCTGACGGC ATCGGTACAG GGCTGGTTCT TCGGGCATAT GGTCTGGTTC
CTGCGCATCG GCCTGCTCAT CGGTGCCCTG TCGATGATTG CTGGCGGCTG GATGACCGAC
CTGTTGGGCA TCACCATCGG CGGGGTCCTG GTCGCCCTGC AGTTGCTCTT CAAAAAGCAG
ACCGGTGAGC TGGCGGCCTC CGCCGACAAG GGGGCAGGCC CACCGCGGCA ATAG
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| Protein sequence | MNSQRHDNQN TAPDDKDPQA PDAPKVAVED VTEIPLGHNE RDVAGWQRWL LYSICVLYTA
FHLYSLNVAP METWAFRISH VAGGLVIGFL LTTAATLNRT ANPRALTTPQ LVPLLASATA
IGYAAFCIGL AWYLREVGGQ PNPPDWVFEH MRYALIGGTG IALLSSWIFH SPANRVHWPD
WLLSLAAIVV AAFIIFALAR WRMAAGTSFV GTTEFLVSLT GILLILEMTR RVAGLALVII
TGVFLFYAFA GPWLPGILEH RGYSFPRFFS YVYTDNGILG PTTAVSSTYI ILFITFAAFL
QASKVGDYFV NFAFAAAGRA RGGPAKVSIF ASGLMGMING TSAGNVVATG SLTIPLMKKV
GYHPRSAGAI EAAASTGGQI MPPIMGAGAF IMAEITGIPY TELAIAAIIP AVLYFLSVYF
MVDLEARKMG MTGLRGDQLP QLGDMLRKVY LFIPIIVLIG ALFMGYSVIR AGTVAMISAA
VVSWLTPHWM GPRAILRALE LGAKMAIPLV AVCACAGIIV GVISLTGVGA RFASMLLGIA
QVDVTIPIIN WTIEGSGQLL AMFFAMCISI LLGMGMPTTA AYAVAASVVA PGLQRLGIDP
LVAHFFVFYF AVISAITPPV ALAAYAASAI ANTDPLRTSV TSFKVGLAAF IVPFMFFYSP
ALLGEGTWGE IARVVVTASI GIYLLTASVQ GWFFGHMVWF LRIGLLIGAL SMIAGGWMTD
LLGITIGGVL VALQLLFKKQ TGELAASADK GAGPPRQ
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